Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01064 ATGTCAGAGAAGAAGAACAAAGTGTCTTATACGGAAAGAGATGCTGTGGCACTGATGCAGAGGTACGACCCAACTACGGTGTTCACCTTGCTTCAAGAAGTTGCGCATTACGCTAAGCCAAAGATTGATTGGAACGAGTTGGTGAAGAAAAGTGGGACTGGGATTTCTAATGTTAGGGAATATCAAATGCTGTGGCGGCATTTGGCCTATCGGCATTCTTTGCCGGAAGATTTTGAAGTTGGGGCTGAACCTTTGGATGATGACAGTGACTTAGAGTGTGAGCTAGAAGCATTACCTCCTGTAAGCGTGGAATCTGCATCAGAGGCGGCTGCATGTGTGAAGGTAATGATTGCTTCTCGCACACTAAGTGAATCTGCACCTAGTAGTTCAACAATCGAGGCTCCATTGACTATAAATGTTCCAGTTTGCCATTCATCTAGAACTCTTATTGAAAGTTTACAACCCTCTGATTTGATGCAAGGGACAAACATTGTTTTTCCAGTCACTGTTCAGAGACAAACATTGCCAACGCACTCTGTACCATCAACAGATGGTTTAGAATCTAAGGGATTAGTTGGTGGTAATCTAGCCTCTAAAAGAAAACGAAAAACATGGTCAGAGGAAGAGGACATACAACTACGAGCTGCTGTTCAGAGATGGGGCGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTCCTACACAGTTAGCACAGAGGTGGAGCATTTTACGAAAGAAAGATGGCACTGTCAATTCTGGAACCATATCAACCAGCACACAATATACTACTGCTGAACAGCTGGCAACCCGACACTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCCGGAGTGTCGGATCCTGTTAAAACATCCATATCAGTTAAAAATCAAATGCAAAATAGAAATATGGTGGAGAAGGTTGTCACTAGTTCGGTACCACCTCAACAACCATCTCAGCACCCTTCTTCTTTGTTGGGATCTTCTGATCCTTTTGTAAAATCTAAATTAGTAGATGAAAAACTAGTCCTGAAGGGTAATATAGTTTCAAATCCTGTGCTAAAATCTACTACAGCTGCATCTGGGATGCGAACAGATCCTCCTTCAAATGCTGTATCACAGTTTAAAATGGCTCCAGTAAAACACAATGTAGACACTAAGGCTGCAGTGAGTTCTTTGACAAAACCATCCATCTCTGCCAATTTGCCTTCTGATCTCAAGAATAAACCAGTTACTCCTTTGGTGGATAAAGTTACATTGAAGCAAGATGTTAATTCCATGAAAGAGTTTAGAGCCTTTGATCCCACCTCTGCACCAAAAGAGACTACACAAAAGGAACCGCCCAAAGTTACTATTGGAAGCCACATCAATAGCAATTTAGATAAGGGAAGATTAGATATAGGTCAAGGCAAGATGCTGCCTATTAGTAGTGAGGAGGCAGGTTTGAAAGATAAAGCAAATCCAGTCACAGATGAGAAACAAACTACTAGTACTAAAGCAAATGCTGTGGTGTACGAAGACCAAGGAAGTGTTAAGAATGCTAGTGAGAATAGCAAACTTGACAAGGAAAGCCTAATTTTTAATCAAGACAAGAAAACTTCAGTTAATGAAAGTTCAAACAATCAAAACATAAATGACAAAAACGTAAATTTGTCCCTACAAGATGAAGACAGCCAAAGTGCCAAGGTGGTAAAAACTGATGGGGGATTATGA 1746 0.4101 MSEKKNKVSYTERDAVALMQRYDPTTVFTLLQEVAHYAKPKIDWNELVKKSGTGISNVREYQMLWRHLAYRHSLPEDFEVGAEPLDDDSDLECELEALPPVSVESASEAAACVKVMIASRTLSESAPSSSTIEAPLTINVPVCHSSRTLIESLQPSDLMQGTNIVFPVTVQRQTLPTHSVPSTDGLESKGLVGGNLASKRKRKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGTISTSTQYTTAEQLATRHSLSLALDMPFKKLTAPGVSDPVKTSISVKNQMQNRNMVEKVVTSSVPPQQPSQHPSSLLGSSDPFVKSKLVDEKLVLKGNIVSNPVLKSTTAASGMRTDPPSNAVSQFKMAPVKHNVDTKAAVSSLTKPSISANLPSDLKNKPVTPLVDKVTLKQDVNSMKEFRAFDPTSAPKETTQKEPPKVTIGSHINSNLDKGRLDIGQGKMLPISSEEAGLKDKANPVTDEKQTTSTKANAVVYEDQGSVKNASENSKLDKESLIFNQDKKTSVNESSNNQNINDKNVNLSLQDEDSQSAKVVKTDGGL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01064 581 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Phco7g01064 581 MobiDBLite consensus disorder prediction 321 341 - -
Phco7g01064 581 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Phco7g01064 581 SMART sant 201 253 IPR001005 -
Phco7g01064 581 MobiDBLite consensus disorder prediction 448 469 - -
Phco7g01064 581 Gene3D - 196 256 - -
Phco7g01064 581 MobiDBLite consensus disorder prediction 441 581 - -
Phco7g01064 581 CDD SANT_TRF 203 252 - -
Phco7g01064 581 MobiDBLite consensus disorder prediction 540 570 - -
Phco7g01064 581 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Phco7g01064 581 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 571 - -
Phco7g01064 581 MobiDBLite consensus disorder prediction 502 526 - -
Phco7g01064 581 Pfam Myb-like DNA-binding domain 202 247 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01064 Phco-Chr7 8788841 8797114 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco7g01064 Myb_DNA-binding 1.9e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01064 7 8788841 8797114 Phco7g01064 7 8788841 8797114 ECH
Phco3g01212 3 10733328 10742419 Phco7g01064 7 8788841 8797114 PCT