Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01047 ATGGGTTACCTCTCTTGCAACGCCCAATCAGCAATCGCCACCTGCGACCCTCACTTCAAGAAGCACAAACCCCTTGCTGCCAAACCAATCCGCCACTTTCACTACGCCGAAATCGCCGCCGCGACTTCTGGTTTCTCTGCCGAGAGCTTCCTAGGCAGAGGCAGCCACGGCAGAGTGTACAAAGCTAGTCTCGACGGCGGAAAGCTCCTTGCCGCCGTCAAAACGACGAAACTGGTCTCTGCCTCGAAGAACCACTCCACTAAATGCACCGGCTGCGGCAACTGCACCAGCCCCACGGAAAACGAGATCGAGATCCTTTCTCAAGTTCCGAGCCCCCGCGTGGTGAACCTCATCGGCTTCAGCACCGACCTAAACGGCAACAAATTAATCGTGGTTGAATACATGCCCAACGGTTCGCTCCACGATCTACTACATTCCGTTAAAAAACCGCCCGGTTGGAACCGGAGGGTCCGGTTCGCGGTTCAGGTTGCGAAAGCGGTTCGCGAATTGCACTCTTCCAACCCTCCCGTTATTCACCGCGACGTTAAGTCTTCCAATGTTTTAATTGACGAGAAATGGAACGCGAGGCTCGGTGACTTTGGCCTTGCCTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACGCCGCCCGCTGGGACGTTAGGGTACCTCGACCCGTGCTATCTTGCGCCAGAGGATCTCAGCGCCAAGAGCGACGTCTTCAGTTTCGGGATCTTGCTGCTGGAGATCATCAGCGGCCGGAACGCCATCGATGTCAATTACAGTCCTCCCTCGGTAGTGGACTGGGCGGTGCCGCTGATCAAGCTCGGTGACTTCGCCAGAATCTGCGACCGCCGGATCGGACCGCCGACGGACCCCGCCGTGGTGCGGCAGCTCGCGGTGCAGGCTGCCAGATGCGTGAGATCGACGGCTGAGAAGCGGCCGTCCATGGCGGAGGTGGTGGAGTGTCTGAATCTAGTAAGGAAGAGGGTTCGTGCGTCGCCGATGTGGATGTCACTGCGACGGCGCGTGGCGCGTATGGAGAGCGCGATGCCGGTGGTGGCGTGGGAGGAGTGTGATGATAATAGTATTAATGATTGTGACAGCAGTGAGAAATTCGCGAGGATGGTGAAAGGTGGGAATGGGAGCAGGAGCAGGAAGAAGGGGAAAGTATCTAGTGTGTGGGGTGTAGGGTATGGGAGTGAGGCCTCCAATAATAATAAAGTCACAAGGTCAAAGTCCATTGGTTCTGCTTCTGGTTCGGTCAGAGGGAGTTGGGTTAAAATGCAGCCACACCAAACCGAGCACGGGTTTGGGAGAAGGAAGGTGAGGTTAAAAAAGTCAAAGTCTATGGGGGTTTTGCAAGGTTCTGCACTTTCGCATTACAGTGAGAATAATAAGAAAAGGAGTTACAACAATAATAATGATGATGATGTATTAGTAATAGGGTCGGCAATGGACAATTTGGTTGTTACAGATAAGTTAGAAAAGAAAATGGTGGAAAAAGCGTTAGTGAAATTGCATAATGAGGGTGGGATTGTGAGGATAGACAATGAAGGAATGATTTGA 1572 0.535 MGYLSCNAQSAIATCDPHFKKHKPLAAKPIRHFHYAEIAAATSGFSAESFLGRGSHGRVYKASLDGGKLLAAVKTTKLVSASKNHSTKCTGCGNCTSPTENEIEILSQVPSPRVVNLIGFSTDLNGNKLIVVEYMPNGSLHDLLHSVKKPPGWNRRVRFAVQVAKAVRELHSSNPPVIHRDVKSSNVLIDEKWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKLGDFARICDRRIGPPTDPAVVRQLAVQAARCVRSTAEKRPSMAEVVECLNLVRKRVRASPMWMSLRRRVARMESAMPVVAWEECDDNSINDCDSSEKFARMVKGGNGSRSRKKGKVSSVWGVGYGSEASNNNKVTRSKSIGSASGSVRGSWVKMQPHQTEHGFGRRKVRLKKSKSMGVLQGSALSHYSENNKKRSYNNNNDDDVLVIGSAMDNLVVTDKLEKKMVEKALVKLHNEGGIVRIDNEGMI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01047 523 MobiDBLite consensus disorder prediction 403 476 - -
Phco7g01047 523 FunFam Serine/threonine-protein kinase-like protein 8 134 - -
Phco7g01047 523 MobiDBLite consensus disorder prediction 403 429 - -
Phco7g01047 523 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Phco7g01047 523 Gene3D Phosphorylase Kinase; domain 1 7 134 - -
Phco7g01047 523 SUPERFAMILY Protein kinase-like (PK-like) 27 325 IPR011009 -
Phco7g01047 523 ProSiteProfiles Protein kinase domain profile. 45 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01047 523 FunFam Serine/threonine-protein kinase-like protein 135 339 - -
Phco7g01047 523 Pfam Protein tyrosine and serine/threonine kinase 48 325 IPR001245 GO:0004672|GO:0006468
Phco7g01047 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Phco7g01047 523 MobiDBLite consensus disorder prediction 454 476 - -
Phco7g01047 523 PANTHER OS01G0253100 PROTEIN 24 330 - -
Phco7g01047 523 SMART serkin_6 45 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g01047 523 Gene3D Transferase(Phosphotransferase) domain 1 135 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01047 Phco-Chr7 8633087 8634658 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phco7g01047 PK_Tyr_Ser-Thr 7.8e-37 CL0016