Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01026 ATGGCTCCTGCACCTTCCTTCACTCTCTCCCTTTTCCTCCTCCTCACTCTCCTCCTGCTCCTAACACACGCAGCACACCCCAGAGAAACTCCACCTCCAACTCCCCATCGAATCATTGCTCCACCGCCGCCCGACAACGACAATGACACCTCGCCGCCGTTCAGACCAGGCATAGCGGTGGTGGTCTGCGTTTTGACCACCATAATCTCCCTCACGTCGCTCCTCCTCCTCTACATCAAACACTGCAACGGCGGCGCCATCCACGGCGCCGGAAGCGGCGGGAGCTCGATTCCGTGGACGGTGGCGCCTTTCTCCGGGAGAAAGAACTCCGGCATTGACCGGTCCGTGGTGGAATCGCTTCCCGTTTTCAGATTCGGAGCGCTGCGAGGACAGAAGGAAGGGCTGGACTGCGCGGTGTGCCTGACGAAGTTCGAGGCGGCGGAGGTTCTGCGGCTGCTGCCGAAGTGCAAGCACGCGTTCCACGTCGAGTGCGTGGACACGTGGCTGGACGCGCATTCCACGTGTCCGCTCTGCCGCTACCGCGTGGATCCGGAGGACATTCTTCTGGTGGAGGACGCAAAGGCATTCCGGCAAAGTCAGCAACAACGGAACAGCCACAACAACAACGAGGAACGCGTGCGATTGAATTTGGACGTGGAGAAGCAGGAGATTGTGGAGTTTGGGAGGAGGCATTCGTCAGTGGGCGAGAGGGAAACAGAGGAGCAGAGTCGGGGGTGGACGTCGTCGTTTAGGAGGTCGTTGGATAGCGCGACATCCAAGAAAAAAAACGAGAGCGTTGGTGTTGTTGGCATTGGTTGGTTCGTACGTGGCAGAAAAGACGGGATGTTGTTAACGCAAGAAGTGGAGAGGGAGGGAGATAGGACAAGCGTGGAACGGAGGTTGGAACACCGTATCATTGTCTCCCCGGGCCCGGGCCCAGGCCCAGGCCAAGGGAAGATGAATGGGGTCCAGCAGCGATGGAGCGACGTGCAAGCTTCGGACCTGCTGTATCTGACGTCGGAGATGATAATGAGTGAATGGCAATGGAACACGCGCCGCCGAGGAAGGGGAAGAGGAAGAGGAAGGGGAAGGGGCCGTACGAATGATGATGAGGTTGAGGACAGTTGGAGTGTCAGAGGGATAATAAATTCGAGAAGTGTGTCTGAGATCACGGGATTGAGCAGGTTCTCCAGCAATGGCAATAATAATAACGAGGAGGACAGAGACAGAGACATAGACAGAGAGTGGGAGCAACAAGGACAGGGAGAGATAGAGAGAGAAGCGGGACTAGTGAGAAGGTGGTTGGGTTGGATTTCAAACTCACGCACACAACAAACCCAACCAGCTGTACGGTAA 1356 0.5686 MAPAPSFTLSLFLLLTLLLLLTHAAHPRETPPPTPHRIIAPPPPDNDNDTSPPFRPGIAVVVCVLTTIISLTSLLLLYIKHCNGGAIHGAGSGGSSIPWTVAPFSGRKNSGIDRSVVESLPVFRFGALRGQKEGLDCAVCLTKFEAAEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLVEDAKAFRQSQQQRNSHNNNEERVRLNLDVEKQEIVEFGRRHSSVGERETEEQSRGWTSSFRRSLDSATSKKKNESVGVVGIGWFVRGRKDGMLLTQEVEREGDRTSVERRLEHRIIVSPGPGPGPGQGKMNGVQQRWSDVQASDLLYLTSEMIMSEWQWNTRRRGRGRGRGRGRGRTNDDEVEDSWSVRGIINSRSVSEITGLSRFSSNGNNNNEEDRDRDIDREWEQQGQGEIEREAGLVRRWLGWISNSRTQQTQPAVR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01026 451 CDD RING-H2_EL5-like 136 179 - -
Phco7g01026 451 MobiDBLite consensus disorder prediction 28 51 - -
Phco7g01026 451 SMART ring_2 137 178 IPR001841 -
Phco7g01026 451 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Phco7g01026 451 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 186 IPR013083 -
Phco7g01026 451 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 31 436 - -
Phco7g01026 451 MobiDBLite consensus disorder prediction 229 245 - -
Phco7g01026 451 FunFam RING-H2 finger protein ATL43 112 186 - -
Phco7g01026 451 MobiDBLite consensus disorder prediction 352 373 - -
Phco7g01026 451 MobiDBLite consensus disorder prediction 393 412 - -
Phco7g01026 451 SUPERFAMILY RING/U-box 131 184 - -
Phco7g01026 451 MobiDBLite consensus disorder prediction 28 50 - -
Phco7g01026 451 MobiDBLite consensus disorder prediction 229 261 - -
Phco7g01026 451 Pfam Ring finger domain 136 179 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01026 Phco-Chr7 8410412 8411767 Transposed