Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01023 ATGTCCGGCCCAGGGGTACGGTTGCACATCCAAGATCACCATGTGGTGATGGATAATGGCATTGTCCAGGTTACGTTATCAAATCCAGGTGGAATTGTCACTGGGATACGATATAATGGTGTTGACAATTTGCTGGAAGTTCTCAACAAGGAGTCTAATAGAGGGTATTGGGACCTCGTTTGGAGTGCGCCAGGAAGCAAAGGGATCTTTGATGTGATTCAAGGAACGTGTTTTAAAGTTATAGTTCAAAATGAGGAACAGGTGGAGCTTTCTTTCACAAGAATGTGGGATCCTTCTCTAGAGGGAAAATTTGTCCCCTTAAATATTGACAAAAGATTTATAATGATCCGTGGTTCATCAGGCTTCTACTCTTACGGAATTTATGAGCACTTAAATGGATGGCCAGATTTTGATCTCAGTGAAACAAGGATTACTTTCAAGCTAAGAAAAGACAAGTTTCAATACATGGCTATGGCAGACAATAGACGAAGGATTCTTCCTTATCCAGAAGATCGGTTACCAGGAAGATGCCAAACCTTGGGCTATGCAGAAGCTGTCCTACTAACCAACCCCAGAGACCCACAATTGCAAGGAGAGGTGGATGACAAGTATCAGTATTCATGTGCAAACATGGATAATCGAGTCCATGGGTGGATATCTTTCAATCCACCAGTTGGTTTCTGGCAGGTCACACCTAGTGATGAGTTTCGTTCCGGTGGACCCCTCAAACAGAATTTGACCTCACACGTAGGCCCCACCACACTTGCAATGTTTCTTAGTGGTCACTATGCGGGACAAGATTTGGTGCCTAAAATTAGAGGTGGTGAATCATGGAAGAAGGTTTTCGGTCCTGTATATATTTATCTCAATTCTGCAGCAGTCGGTGATGACCCACTTTGGTTATGGGAGGATGCAAAAATACAGATGATGAATGAAGTTCAAAGTTGGCCATATTATTTCCCAGCTTCAGAGGATTTTTTAAAATCAGATCAACGGGGCAACATCAGTGGCAGATTACTTGTCTTAGACAAGTTCATCTGCACAGACTTAATATCAGCAAATGGTGCTTATGTTGGCCTGGCCCCACCTGGAGATGCTGGGTCATGGCAAAGAGAATGCAAGGACTATCAATTCTGGACCAGAGCAGATGGGAATGGATTTTTTACTATTAGAAACGTACGTCCAGGCGACTATAACCTTTTTGCTTGGGTGCCTGGCTTTGTTGGGGACTACAAATTTGTAGATTTCGTGAAGATAACGCCAGGTTCTTACACTGAATTGGGTGAACTTGTATATGAGCCTCCAAGAGATGGTCCCACATTGTGGGAAATAGGTATTCCTGATAGATCCGCTGCAGAATTTTACGCTCCTGATCCCAATCCCCAATATATTAATAGGCTTTTTATCAACCACCCAGACAGGTTCAGGCAGTATGGATTGTGGGACAGGTATACAGAATTGTATCCTGATGCAGATTTGGTTTACACAGTTGGTGTTAGTGACTTTAGGAAGGACTGGTTTTATGCGCAGGCTCCGAGGAAAAAAGAGGATAACACTCTCCAAGGGACAACTTGGCAAATCAAGTTCGAAGTCAGTGGCGTGGTTCAGGGAAGTACATACAAACTGAGAGTTGCAATTGCATCAGCAACCTTAGCTGAATTGCAGATTAGAGTAAATGATCCCAATGCTGGGCGACCCTTATTTACCAGTGGATTAATAGGAAGGGACAACTCAATTGCAAGACTTGGAATTCATGGAATCTATTGGCTTTACAATGTGAGTATACCAGGTTCTCTTCTTATTGATGGCACAAATACCATATATTTTACGCAACCAAGATGCACCAGTCCCTTCCAAGGTATCATGTATGATTATATTCGTTTGGAAGGCCCACCTTGTGAAGGAATTTAA 1911 0.4291 MSGPGVRLHIQDHHVVMDNGIVQVTLSNPGGIVTGIRYNGVDNLLEVLNKESNRGYWDLVWSAPGSKGIFDVIQGTCFKVIVQNEEQVELSFTRMWDPSLEGKFVPLNIDKRFIMIRGSSGFYSYGIYEHLNGWPDFDLSETRITFKLRKDKFQYMAMADNRRRILPYPEDRLPGRCQTLGYAEAVLLTNPRDPQLQGEVDDKYQYSCANMDNRVHGWISFNPPVGFWQVTPSDEFRSGGPLKQNLTSHVGPTTLAMFLSGHYAGQDLVPKIRGGESWKKVFGPVYIYLNSAAVGDDPLWLWEDAKIQMMNEVQSWPYYFPASEDFLKSDQRGNISGRLLVLDKFICTDLISANGAYVGLAPPGDAGSWQRECKDYQFWTRADGNGFFTIRNVRPGDYNLFAWVPGFVGDYKFVDFVKITPGSYTELGELVYEPPRDGPTLWEIGIPDRSAAEFYAPDPNPQYINRLFINHPDRFRQYGLWDRYTELYPDADLVYTVGVSDFRKDWFYAQAPRKKEDNTLQGTTWQIKFEVSGVVQGSTYKLRVAIASATLAELQIRVNDPNAGRPLFTSGLIGRDNSIARLGIHGIYWLYNVSIPGSLLIDGTNTIYFTQPRCTSPFQGIMYDYIRLEGPPCEGI 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01023 636 Gene3D - 438 629 - -
Phco7g01023 636 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 632 - -
Phco7g01023 636 SUPERFAMILY Starch-binding domain-like 330 428 IPR013784 GO:0030246
Phco7g01023 636 Gene3D - 328 427 - -
Phco7g01023 636 Gene3D - 8 301 IPR014718 GO:0030246
Phco7g01023 636 FunFam Rhamnogalacturonate lyase B 328 427 - -
Phco7g01023 636 Pfam Rhamnogalacturonate lyase family 9 200 IPR010325 -
Phco7g01023 636 SUPERFAMILY Galactose-binding domain-like 437 629 IPR008979 -
Phco7g01023 636 CDD RGL4_C 442 629 - -
Phco7g01023 636 CDD RGL4_N 6 298 - -
Phco7g01023 636 CDD RGL4_M 331 430 IPR029413 -
Phco7g01023 636 SUPERFAMILY Galactose mutarotase-like 14 294 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phco7g01023 636 Pfam Polysaccharide lyase family 4, domain III 440 628 IPR029411 -
Phco7g01023 636 Pfam Polysaccharide lyase family 4, domain II 354 426 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01023 Phco-Chr7 8374227 8380696 Wgd