Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01013 ATGGAGCACTGTGACCAGGATTTCTTGGAGGAATTGATGACTCTGAGAAGAGAAACGTGGGACACCAATCCAAGTACAGAAGAAAACCAGTTCTTCTGTAATGGCTGGAGTAGTTTTGACTGTTTTGATCAAAACTCTCTACCTTACCTCCCGAACTCTTCTTCTTCTCAACAAGTTCCTCAAAGCCACAACGAATACTACCCCTTCAATGAAATCTATGGCTCTTTACTCGATGAAACCTCACCACAGATTATCGATTCATACTATAGTACCCTTCATACTCCACTCAATACCCTTGGTCAAGAGGATTATCCATTGTCCATTATGGAAGAAGAGGACCCCGGTATGCTCGGGGAAGAGCTTAAGAATTTGGAGCTGCAAGCCACATGCAAAGCGGAGCCATCCCAATCCTCTGAAATGCCAGTTTTCAACATGGGAACGGGTCTGGAAAGAAAGAATCGGTCAAAGAAGCTTCAGGGACAACCCTCCAAGAATCTAATGGCGGAGAGGAGAAGAAGAAAGAGATTAAATGACAGGCTCTCAATGCTGAGAGCAATTGTCCCCAAGATAAGTAAGATGGATAGAACATCTATACTTGGAGACACTATTGATTACATGAAAGAGCTTCTGGAGAAGATCAACAATCTTCGACAAGAAGGAGAACTAGATTCTAAAATGGCTGGCATTTTCAAAGATGTAAAGCCAAATGAAATCCTAGTGAGAAATTCACCCAAGTTTGAAGTGGAGAGGAGTGTGGACACACGGGTTGAAATTTGCTGTGCTGGAAAGCCAGGATTGTTACAATCAACAGTAAACACCCTGGAGGCCTTAGGCCTTGAGATCCAACAATGTGTTATTAGCTGTTTCAATGATTTCACAATGCAAGCTTCTTGCTCAGAGGTATCGGAACAAAGGGCAATGCTGAGTTCTGAAGATATAAAGCAATCGTTGTATAGAAGTGCAGGGTATGGAGGAAGATTATGCTGGACTCGTCCGTGCGATTCTCAGGCAAAGTTAGCAATTATTAATGTTGATGTGGATGAGATAATGTAG 1053 0.4264 MEHCDQDFLEELMTLRRETWDTNPSTEENQFFCNGWSSFDCFDQNSLPYLPNSSSSQQVPQSHNEYYPFNEIYGSLLDETSPQIIDSYYSTLHTPLNTLGQEDYPLSIMEEEDPGMLGEELKNLELQATCKAEPSQSSEMPVFNMGTGLERKNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLEKINNLRQEGELDSKMAGIFKDVKPNEILVRNSPKFEVERSVDTRVEICCAGKPGLLQSTVNTLEALGLEIQQCVISCFNDFTMQASCSEVSEQRAMLSSEDIKQSLYRSAGYGGRLCWTRPCDSQAKLAIINVDVDEIM 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01013 350 CDD ACT_UUR-ACR-like 254 295 - -
Phco7g01013 350 SMART finulus 166 215 IPR011598 GO:0046983
Phco7g01013 350 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 58 322 - -
Phco7g01013 350 Pfam Helix-loop-helix DNA-binding domain 166 209 IPR011598 GO:0046983
Phco7g01013 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 209 IPR011598 GO:0046983
Phco7g01013 350 Coils Coil 199 219 - -
Phco7g01013 350 Gene3D - 168 241 IPR036638 GO:0046983
Phco7g01013 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 221 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01013 Phco-Chr7 8293157 8294793 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco7g01013 HLH 1.6e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01013 7 8293157 8294793 Phco7g01013 7 8293157 8294793 ECH