Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00992 ATGTTCGCCGCCTTTCGCGTCCTCCTCCTTCTCTCACTCTTCTCTCTACTCAGCGCCCAACTCCACGACCAGCGTCAAATCCTTCTCAACCTAAAGTCCTCCCTACACAATTCAAAATTTTCAAAACTCTTTGACTCATGGAATGACAACAACTCGGTTTGCAGTTTCCACGGAGTAACTTGCAACACCCTCCGTTCCGTCACCGAAATCAACCTCTCCGACCAAACTCTGACCGGGGCTCTCCCCTTCGACTCTCTCTGCAACCTTCCATCGCTCCAGAAACTCGCGTTCGGCTTCAACTACTTGTACGGGAAAGTTTCAGAGGACATTAGAAAATGCGTCAACTTGCGCTACTTGGATTTGGGAAACAACCTTTTCTCTGGTCCCTTCCCCGACATATCTCCTCTTAATCAGTTGCAGTACTTGTTTTTAAACAAAAGTGGATTTTCGGGCACTTTTCCGTGGCAGTCGCTGTTAAACATGACGGGTCTGTTGCAGTTAAGTGTCGGAGATAACCCTTTCGATTTCACCCCGTTTCCCAAAGAGGTTGTGAGTCTCAAGAAGCTGAATTGGCTCTATCTATCCAACTGCACCCTCGGAGGGAAACTTCCGGTGGGACTCGGCAACCTCACGGAGCTCACGGAATTGGAATTCTCCGACAATTTCATCACCGGCGAACTTCCCGCGGAGATTGTGAACCTTCGGAAACTCTGGCAGTTTGTGTTTTTCAACAATACCTTCACGGGGAAGATTCCAACCGGGTTTAGAAACCTCAAGGGGCTTGTAAATTTGGACGGGTCCACGAATAGACTTGAAGGGGATCTCTCAGAATTGAAGTACTTGACCAATTTGGTTTCGCTGCAATTTTTTGAGAACAATTTATCGGGGGAAATTCCGAATGAAATAGGCGAATTCAAACGCCTTCGGTCTCTGTCTCTGTACAGGAACAAATTGACAGGTCCTATTCCTCAGAAGGTTGGTTCCTGGGCCGAGTTTGATTTCATCGACGTGTCGGAGAATTTCTTGACGGGGACTATTCCGCCGGAGATGTGTAAAAAGGGGAAGATGACCGCACTGCTCGTGCTTCAGAACAAGCTCACTGGCGAGATTCCGGCCACCTATGGAGACTGTTGGAGTCTGAAGCGATTAAGAGTCAGTAATAACTTGCTCTCGGGTACCGTGCCTCCCGCGATTTGGGGATTGCCTAACGCCGAAATTATCGATATTGAGCTGAATCAGTTGGAAGGTATGGTTGCTTCGGATATCAGAAACGCCAAAAAATTAGCTTCAATACTCGCCAGGCAGAATCGGTTGTCCGGTGAAATACCCGAAGAAATCTCAAAAGCAACGTCGTTGCTGAGTGTGGACCTGAGCGAGAATCAGATTTCAGGGAAGATTCCAGAAGGAATCGGGGAGCTTAAAGGACTAGGTAGCCTTCATTTGCAGAGAAATAGGTTATCAGGTTCGATACCCGAATCTCTCGGTTCCTGCAAATCCCTCAACGACATTGACCTATCGAGGAATTCACTCTCTGGAGAAATCCCCGCGTCGTTGGGTTCTTTCCCTGCGCTGAATTATCTGAATCTTTCAGACAACAATCTCTCTGGGGAAATTCCTCGAGGGTTATCGTTCCTCAGGTTAAGCCTCTTTGACCTATCGTACAACCGGTTAACGGGTCCAATTCCTCAGGCTCTAACCCTCGAAGCTTACAACGGAAGCCTCTCCGGAAACCCCGGTTTGTGCAGCGTCGACGCGATCAACTCCTTCCCTCGTTGCTCTTCATCCTCTGGCATGTCCAAGGACATACGTGCTCTCATCATTTGCTTCGCGATAGCGTCAATACTATTGCTTTCGTGTTTGGGCGTTTACTTGCAGCTGAAGAGGAGGAAGGAGGAGGGAGAGAGATTCGGAGAACGTTCGTTGAAGAAAGAATCATGGGACGTGAAATCCTTCCACGTGTTAAGTTTCTCGGAGGGGGAGATTCTAGATTCCATTAGGCAGGAGAATCTGATAGGGAAAGGAGGTTCGGGGAACGTGTACAGAGTCACGCTTTCCAACGGAAAAGAACTGGCGGTGAAGCATATTTGGAACACCGATGTACCCGCCCGGAAAAAGTCGTGGAGTAGTACTTCCATGCTTGGGACTAAGCAGGGTGGGAAGTCAAAGGAGTTCGACGCAGAGGTTCAGGCTTTGAGCTCCATAAGGCACGTGAATGTGGTGAAGCTTTATTGCAGCATAACGAGTGAAGATTCGAGCTTGTTGGTGTACGAGTATTTACCCAATGGAAGCTTGTGGGATCGGCTTCACACAAGTAGGAAGATGGAGCTTGATTGGGAAACGAGGTATGAAATCGCTGTTGGGGCAGCCAAAGGATTGGAGTATTTGCATCACGGGTGCGAACGGCCCGTGCTTCATAGAGATGTCAAGTCCAGTAACATCTTGTTGGATGAGTTTTTGAAACCCAGGATTGCGGATTTTGGACTTGCTAAGGTTGTTCAAGCCAACGTTGGAAAGGATTCTTACACTGGTGTCATTGCCGGAACCCACGGTTACATTGCTCCTGAATATGGCTATACATACAAAGTGAATGAGAAGAGTGACGTGTACAGCTTTGGAGTGGTGTTGATGGAGCTAGTAACTGGAAAAAGGCCAATTGAGGCAGAATTTGGGGAGAATAAGGACATGGTGAGTTGGGTCCATAACAAGGCACGGAGCAAAGAGGGTCTTAGCAGTGCTGTGGATTCGAGGATCCCAGAAATTTACAAAGAGGAAGCTTGCAAGGTTTTGAGAACCGCAGTTCTATGCACGGGAACTCTTCCAGCTTTAAGACCCACCATGAGAGCTGTGGTTCAAAAACTTGAAGATGCTGAGCCTCTTAAACTGGTTGGGATTGTTATCAGCAAAGACGGTGGTGAAAAGAAAATAGGAGTGAATGAGAAGAAATAA 2946 0.4786 MFAAFRVLLLLSLFSLLSAQLHDQRQILLNLKSSLHNSKFSKLFDSWNDNNSVCSFHGVTCNTLRSVTEINLSDQTLTGALPFDSLCNLPSLQKLAFGFNYLYGKVSEDIRKCVNLRYLDLGNNLFSGPFPDISPLNQLQYLFLNKSGFSGTFPWQSLLNMTGLLQLSVGDNPFDFTPFPKEVVSLKKLNWLYLSNCTLGGKLPVGLGNLTELTELEFSDNFITGELPAEIVNLRKLWQFVFFNNTFTGKIPTGFRNLKGLVNLDGSTNRLEGDLSELKYLTNLVSLQFFENNLSGEIPNEIGEFKRLRSLSLYRNKLTGPIPQKVGSWAEFDFIDVSENFLTGTIPPEMCKKGKMTALLVLQNKLTGEIPATYGDCWSLKRLRVSNNLLSGTVPPAIWGLPNAEIIDIELNQLEGMVASDIRNAKKLASILARQNRLSGEIPEEISKATSLLSVDLSENQISGKIPEGIGELKGLGSLHLQRNRLSGSIPESLGSCKSLNDIDLSRNSLSGEIPASLGSFPALNYLNLSDNNLSGEIPRGLSFLRLSLFDLSYNRLTGPIPQALTLEAYNGSLSGNPGLCSVDAINSFPRCSSSSGMSKDIRALIICFAIASILLLSCLGVYLQLKRRKEEGERFGERSLKKESWDVKSFHVLSFSEGEILDSIRQENLIGKGGSGNVYRVTLSNGKELAVKHIWNTDVPARKKSWSSTSMLGTKQGGKSKEFDAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVLHRDVKSSNILLDEFLKPRIADFGLAKVVQANVGKDSYTGVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEAEFGENKDMVSWVHNKARSKEGLSSAVDSRIPEIYKEEACKVLRTAVLCTGTLPALRPTMRAVVQKLEDAEPLKLVGIVISKDGGEKKIGVNEKK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00992 981 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Phco7g00992 981 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Phco7g00992 981 SUPERFAMILY L domain-like 41 323 - -
Phco7g00992 981 Gene3D Phosphorylase Kinase; domain 1 648 758 - -
Phco7g00992 981 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 15 953 - -
Phco7g00992 981 FunFam Probable inactive receptor kinase RLK902 21 180 - -
Phco7g00992 981 FunFam Leucine-rich repeat receptor-like protein kinase TDR 278 594 - -
Phco7g00992 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Phco7g00992 981 Pfam Protein kinase domain 667 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00992 981 FunFam Receptor-like protein kinase HAIKU2 648 758 - -
Phco7g00992 981 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Phco7g00992 981 Gene3D Ribonuclease Inhibitor 22 134 IPR032675 -
Phco7g00992 981 Gene3D Transferase(Phosphotransferase) domain 1 759 962 - -
Phco7g00992 981 SMART serkin_6 665 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00992 981 Gene3D Ribonuclease Inhibitor 355 594 IPR032675 -
Phco7g00992 981 FunFam Leucine-rich receptor-like protein kinase family protein 181 277 - -
Phco7g00992 981 SUPERFAMILY Protein kinase-like (PK-like) 657 953 IPR011009 -
Phco7g00992 981 ProSiteProfiles Protein kinase domain profile. 665 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00992 981 SUPERFAMILY L domain-like 195 539 - -
Phco7g00992 981 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 759 964 - -
Phco7g00992 981 Gene3D Ribonuclease Inhibitor 135 354 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00992 Phco-Chr7 8087581 8090635 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phco7g00992 Pkinase 1.2e-42 CL0016