Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00991 ATGAACCATCATCCCTTCATCACCCTCTTCTCTACCATACTAATCGTTTCCACCACCACCCTCTCACTCTCCCAGGTTATCATCACCAAGAACCAGTCACAGTTTTTCGTTCTCATCAAAGACTCTCTCCCCGGGAAGTACCCCATGAATTGGGACGCTGAGAAACCCGTGTGTAGCTTCACCAGAGTTACCTGCAACACCCAAGGTGACGTTATCAGCCTCGACCTTTCAGGTTGGTTATCACTTGCTGGAAAGTTCCCATCAGATACATGCTCTTACCTCCCACAGTTACGTTCTCTCCACCTCGGCCACACCAGGTTCGAGTTCAACATAGACACCATCCTCAACTGTTCCCACTTGGAAGAGCTTAACATGAACCACATGTTCCAGACCGGCACGCTCCCAGATTTCTCTTCCTTGAAATCTCTCAGGATTCTCGACTTGTCCTACAACCTCTTCACAGGCCAGTTCCCCATGTCAGTGTTCAACCTCACCAACCTCGAGGTGCTAAACTTCAATGAAAACGGAGGCTTCAACCTGTGGCAGTTACCTGCAGATATTGACAGGTTGAAAAACCTCAGGTCCGTGGTGCTAACGACGTGCATGGTGCATGGCCGAATCCCTGCATCCATAGGGAACATAACTTCCCTCATCGATCTTGAGCTGAGTGGGAATTTCCTCACGGGACAAATTCCGAAAGAGCTTGGTCAGCTGAGGAACCTTCAACAGCTTGAGCTTTACTATAACTACCATCTCGTTGGGAACATTCCAGAGGAGTTGGGGAACCTCACGGAGCTCGTGGATTTGGATATGTCAGTGAACAAGTTCACTGGGAGTATCCCCGCGTCGGTCTGTAGTCTTCCCAAGCTTCAAGTCTTGCAGCTCTACAACAACAGCCTCACAGGAGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTAAGAATGCTGTCTCTCTATGACAACTTTCTTGTAGGACAGGTTCCCAACAAACTGGGACAGTTCTCTAGAATGTTACTTCTTGACTTGTCGGAGAACAAACTTTCTGGTCCGTTGCCAAGCGAGGTTTGCAAGGGTGGTACGCTAGAGTACTTTCTCGTTCTGGATAACATGTTTTCTGGAGAGATACCACAGAGTTATGCTAACTGCATGATGCTGTTGAGGTTTAGAGTGAGTAACAACCGTTTGGAGGGTTCCATTCCCGCGGGACTCCTTGGTTTACCACACGTTTCAATCATTGATTTGAGTAGCAATAACTTGAATGGTCCAATTCCTGAGATTAACGGGAATTCTAGAAATCTTTCTGAACTGTTCCTTCAGAGGAACAAAATTTCAGGTGTCATAACTCCCACAATATCTCGAGCCATGAGCTTGGTCAAAATAGATTTCAGTTACAATCTTCTATCTGGTTCAATCCCTTCCGAAATAGGCAACCTCAGAAGACTCAATTTGCTTATGTTGCAAGGGAACAAGCTGAATTCTTCCATCCCCGGCTCATTCTCTTCCTTGGAGTCTCTCAACCTTCTTGATCTCTCCAACAATCTTTTAACTGGAAGCATCCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCTATTAACTTCTCGCACAATATGCTTTCGGGTCCAATTCCTCCCAAACTGATCAAAGGAGGCTTGGTGGAAAGTTTTGCAGGGAATCCTGGTTTGTGTGTGCTACCGGTGTATGCTAATTCATCGGATCAAAACTTCCCCATATGTGCAAGTGCCTACAAGAGCAAGAGGATCAACACCATCTGGATAGCTGGGGTGTCAGTGGTTTTGATCTTTATTGGGTCTGCCCTGTTTCTCAAACGTAGGTGCAGCAAAGACACTGCTGCAGTGGAACATGAGGAGACACTGTCTTCTTCGTTCTTCTCTTATGACGTTAAGAGCTTCCACAAGATCTCTTTCGACCAAAAGGAGATCGTTGAGTCCTTGGTGGACAAGAACATAATGGGGCATGGAGGGTCTGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGATATTGTCGCAGTGAAGAGGCTGTGGAGTCGCAAGTCCAAGGATTCGACTCCAGAGGATCGGTTGTTTGTAGATAAGGCATTGAAGGCAGAGGTGGAGACCTTAGGAAGCATAAGACACAAGAACATAGTGAAACTATACTGCTGCTTCTCCAGTTTCGACTGCAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATTCCCTGCACAAGGGTTGGATCATTTTGGATTGGCCTACTCGTTATAGAATTGCACTGGGGATTGCACAGGGTTTAGCATACCTTCACCATGATTTGCTTCTTCCAATTATCCATCGAGACATTAAGTCAACAAATATCCTGCTGGATGTTGATTACCAGCCCAGGGTTGCAGACTTTGGGATTGCCAAGGTTTTGCAAGCAAGAGGAGTGAAGGATTCCACAACAACTGTCATTGCAGGAACATATGGTTACTTAGCCCCAGAATTTGCATATTCATCAAGGGCCACCACCAAGTGCGACGTCTACAGTTTTGGGGTGATTTTGATGGAACTCTTAACTGGGAAGAAGCCCGTGGAGGCAGAGTTTGGAGAGAACAGAAATATTGTTTTCTGGGTTTCCAACAAAGTAGAAGGCAAGGAGGGGGCGAGACCAAGTGAGGTGTTTGACCCGAGGTTATCATGTTCATTCAAGGATGACATGATCAAAGTGTTGCGGGTTGCCATTCGCTGCACCTACAAAGCCCCAACGAGCAGACCAACCATGAAAGAGGTTGTTCAGCTTCTGATTGAGGCAGAGCCACGCGGTTCCGATTCTTGCAAGTTGTCAACAAAAGATGTATCAAATGTCACCGTAGTAAAGAAACCATATGAATTATAA 2889 0.4624 MNHHPFITLFSTILIVSTTTLSLSQVIITKNQSQFFVLIKDSLPGKYPMNWDAEKPVCSFTRVTCNTQGDVISLDLSGWLSLAGKFPSDTCSYLPQLRSLHLGHTRFEFNIDTILNCSHLEELNMNHMFQTGTLPDFSSLKSLRILDLSYNLFTGQFPMSVFNLTNLEVLNFNENGGFNLWQLPADIDRLKNLRSVVLTTCMVHGRIPASIGNITSLIDLELSGNFLTGQIPKELGQLRNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCSLPKLQVLQLYNNSLTGEIPGAIENSTALRMLSLYDNFLVGQVPNKLGQFSRMLLLDLSENKLSGPLPSEVCKGGTLEYFLVLDNMFSGEIPQSYANCMMLLRFRVSNNRLEGSIPAGLLGLPHVSIIDLSSNNLNGPIPEINGNSRNLSELFLQRNKISGVITPTISRAMSLVKIDFSYNLLSGSIPSEIGNLRRLNLLMLQGNKLNSSIPGSFSSLESLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNMLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDQNFPICASAYKSKRINTIWIAGVSVVLIFIGSALFLKRRCSKDTAAVEHEETLSSSFFSYDVKSFHKISFDQKEIVESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSRKSKDSTPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSFDCSLLVYEYMPNGNLWDSLHKGWIILDWPTRYRIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDYQPRVADFGIAKVLQARGVKDSTTTVIAGTYGYLAPEFAYSSRATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSCSFKDDMIKVLRVAIRCTYKAPTSRPTMKEVVQLLIEAEPRGSDSCKLSTKDVSNVTVVKKPYEL 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00991 962 Gene3D Phosphorylase Kinase; domain 1 635 736 - -
Phco7g00991 962 SMART LRR_typ_2 214 238 IPR003591 -
Phco7g00991 962 SMART LRR_typ_2 479 502 IPR003591 -
Phco7g00991 962 SMART LRR_typ_2 503 527 IPR003591 -
Phco7g00991 962 SMART LRR_typ_2 287 311 IPR003591 -
Phco7g00991 962 SMART LRR_typ_2 94 117 IPR003591 -
Phco7g00991 962 SMART LRR_typ_2 335 359 IPR003591 -
Phco7g00991 962 SMART LRR_typ_2 164 190 IPR003591 -
Phco7g00991 962 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 737 950 - -
Phco7g00991 962 Pfam Protein kinase domain 654 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00991 962 SUPERFAMILY L domain-like 70 352 - -
Phco7g00991 962 SMART serkin_6 652 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00991 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Phco7g00991 962 Gene3D Ribonuclease Inhibitor 254 574 IPR032675 -
Phco7g00991 962 FunFam receptor protein-tyrosine kinase CEPR1 635 736 - -
Phco7g00991 962 SUPERFAMILY L domain-like 253 566 - -
Phco7g00991 962 Gene3D Transferase(Phosphotransferase) domain 1 737 956 - -
Phco7g00991 962 Gene3D Ribonuclease Inhibitor 179 253 IPR032675 -
Phco7g00991 962 Gene3D Ribonuclease Inhibitor 31 178 IPR032675 -
Phco7g00991 962 ProSiteProfiles Protein kinase domain profile. 652 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00991 962 PANTHER LEUCINE RICH REPEAT KINASE 2 182 936 - -
Phco7g00991 962 FunFam Receptor protein-tyrosine kinase CEPR1 287 573 - -
Phco7g00991 962 SUPERFAMILY Protein kinase-like (PK-like) 639 932 IPR011009 -
Phco7g00991 962 FunFam Leucine-rich repeat receptor-like protein kinase 180 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00991 Phco-Chr7 8062478 8065885 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phco7g00991 Pkinase 4e-47 CL0016