Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00970 ATGTTAACACATAAAGCGGGATTGGAACACGTGGCTCGCTATCCGTTATTCGACCGTTGCAAGAAGAAAGCTGTTGTGCTCTGTGTTAATGCAAAACACACAACGCAACAGCACAACACAGCCTCTGTGTCCATTAAAACCACTCTCTCAGATTCTCTCTCTCTCTCCATCTTTCTTTTCCATTGCGCTTCCATCATCATGGCCATCGCAACAGAGACTCAGCCTCATCAGCCTCAACAACACAAGGATTCTTCTGATGTGTCGGGTTCAGCTGCGGAGCGGAGGTGGACGCTGGACGATTTCGACATTGGAAAGCCTCTTGGAAGGGGAAAATTCGGCCACGTCTATTTGGCAAAAGAGAAGAGTAGTAATCACATTGTTGCTTTGAAAGTACTCTTTAAGACCCAATTGCAGCAATCCCAAGTTGTGCATCAACTTCGGCGAGAAGTTGAGATACAGAGTCATCTTCGGCATCCCCACATCTTGCGCCTCTATGGATACTTTTATGATCAGAAACGAGTGTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAAGAATTGCAAAAATGCAAATATTTCAGTGAAAGGCGTGCAGCTACTTATGTTGCATCATTGGCCCGGGCCCTAATATATTGCCATGGAAAACATGTAATACACAGGGACATTAAACCAGAGAACCTTCTTGTTGGTGCACAGGGTGAGTTAAAAATAGCAGACTTTGGGTGGTCAGTGCATACATTTGATCGTAGGCGCACCATGTGTGGCACACTGGATTATCTTCCTCCCGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGCGTGCTGTGCTATGAATTTCTTTATGGGGTGCCTCCCTTTGAGGCTAAAGAGCATTCGGATACCTACAGGAGAATAATACATGTGGATCTCAAGTTTCCTGCAAAACCAATTGTGTCTTCTGGTGCAAAGGATCTTATCAGTCAGATGCTGGTTAAGGATTCCTCGCAACGGTTACCATTGCACAAACTCCTTGAACATCCTTGGATTGTTCAGAATGCGGAGCCTTCTGGTGTATATAGGAGCTAG 1095 0.4511 MLTHKAGLEHVARYPLFDRCKKKAVVLCVNAKHTTQQHNTASVSIKTTLSDSLSLSIFLFHCASIIMAIATETQPHQPQQHKDSSDVSGSAAERRWTLDDFDIGKPLGRGKFGHVYLAKEKSSNHIVALKVLFKTQLQQSQVVHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLVGAQGELKIADFGWSVHTFDRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIHVDLKFPAKPIVSSGAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYRS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00970 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Phco7g00970 364 FunFam serine/threonine-protein kinase Aurora-1 185 360 - -
Phco7g00970 364 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 72 363 IPR030616 GO:0004672
Phco7g00970 364 SUPERFAMILY Protein kinase-like (PK-like) 89 356 IPR011009 -
Phco7g00970 364 FunFam Aurora kinase A 93 184 - -
Phco7g00970 364 Gene3D Phosphorylase Kinase; domain 1 89 184 - -
Phco7g00970 364 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Phco7g00970 364 CDD STKc_Aurora 100 353 - -
Phco7g00970 364 SMART serkin_6 101 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00970 364 Gene3D Transferase(Phosphotransferase) domain 1 185 361 - -
Phco7g00970 364 Pfam Protein kinase domain 103 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00970 364 ProSiteProfiles Protein kinase domain profile. 101 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00970 Phco-Chr7 7877782 7880994 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Phco7g00970 Pkinase 6.3e-72 CL0016