Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00965 ATGTCCAAAATGCCCCTCTTCGTTTCCTTTCATTTGTTTCTGTTATTCACCATCTCTGTACCCTCCCGGGTAATTTCGGAAACTGAACAAACAATCCTACTCACACTCAAACGTCAACTGGGAGACCCACCGTCGCTTCAATCATGGAAACCGTCTCCGTCGGCGCCGTGCGACTGGACGGAGATTGGCTGCGGCAGCGACGGCGCCGTCACCAATCTTCTCCTCTCCAGCAAAGACATCACCACCACCAAGAGCCTTCCTTCCACAATCTGCAATCTCGAACACCTCCTCATGCTTGACCTCTCCAACAACTCCATTGCCGGCGAGTTTCCTACAGCCTTGTACGAATGCTCCAACCTCCAGTACCTCGACCTGTCGCAGAACTACCTGGCCGGAGCGGTCCCCGCAGACGTGGACCGCCTCAAAACCCTCACTTTCCTCAGCCTCGGCGCCAACTCCTTCTCCGGAGAGATCCCGGCTGCGATCGGGAACCTGCCGGAACTGCAAACGCTGCATCTTTTCAAAAACAACTTCGAGGGAACCGTTCCGAAGGAAATCGGAAACTTGTCGAACCTCCAATACTTGGGTTTGGCTTATAATCTCAAACTCGCGCCGTGGGAGATCCCGTTGGAGTTTAGGAAATTAAGAAATTTGAGGCGTCTGTGGATGACGCAGTGTAACCTGATCGGAGAGATTCCGGAATATTTCGGGGATATGTTCACGTACCTCAAACGGTTGGATTTGTCGAAGAACAAACTATCAGGGAGCATTCCGAGGACTTTGTTCTCGCTGAGGAAGTTGAGGGTCTTGTACCTGTTCAGTAACAGGTTGTCGGGTGTGATTCCTAGTACTACGATGCAGTGTTTGGAATTAACAGAAATTGATTTCGCGAAGAATAATTTGACGGGTTCCATACCCCGAGAGTTTGGAAAGTTAAAGAACTTGAGTACCTTGCACTTGTACGAGAATCACTTGTTCGGTGAGATTCCCGTAAGTTTAAGCCAAATTCCTAGTCTTAAGTATTTCAGGGTTTTCAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCATTCCAAGCTTGCAGCGTTTGAGGTTTCTGAGAACCAACTCAGTGGTGGGTTGCCGGAACATTTATGTGCAGGTGGTGCGCTTATTGGTCTGGTTGTTTCTTCCAACAATTTTAGTGGGCCTTTGCCTGAGTGGATTGTGAATTGTCCTTCTCTCGCCACGGTTCAGGTTTATCATAACAAGTTTTCGGGTGAGGTTCCTTTGGGTTTGTGGACTATGAGTAACCTTTCGTCCTTGATTTTGAGCAACAACTCTTTTTCTGGGCCTCTTCCGAGTCAAATATTCTGGAATATGGAAAGGATTGAGATCGCAAACAACAACTTTTCGGGTGGGATATCCGTTGGGATTACTTCAGCCAAAAATCTGGGGTTTCTTGATGCGAGAAACAACATGCTTTCGGGTGAAATTCCAAGGGAATTGACTCAACTTTCTAAGCTCGTTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCTTCTGAGATTATTTCGTGGCAATCACTGAACACTTTGACACTATCACGAAACAAACTTTCTGGCCAAATTCCCACGGCTATTACTGCTCTTCCCCGCCTGGCTTACCTGGACTTGTCTCAAAATGACATATCAGGTGAAATTCCCCCTCAGTTTGATAGGTTGAGGTTTGTTTTTCTCAACTTGTCCTCCAACCAGCTATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCATTTGAAAACAGTTTCTTGAACAATCTTCGTCTATGTGCTTACAATCCAAACATCCACCTTGATAATTGCTTGACCAAAACCGCATCAGCGGCACCACAGTCGAGCAATTCGTCTTCGAATTCACTGGCCCTGATTCTGGCTGCCACCGCCGTTGTGTTACTGGCCATAGTTTCCTTAGTCTTCTATACGTTGAAAACGCAATGGGGCAAAAAGCACTGCGGGCATAAAAATAAGGTTGCAACGTGGAGGCTCACTTCATTCCAGAGGCTTGATCTCACGGAAATAAACTTCCTCTCAAGTTTGACAGACAATAACCTCATTGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTACAAATCGTCCAGGTGAGTATGTTGCGGTGAAGAAGATCTGGAATCGCGAGGATGTGGATTACACGCTGGAGAAAGAGTTCCAGGCTGAGGTTGAGATCCTGGGCAATATTCGGCACTCGAATATAGTGAAGCTTTTGTGCTGCTATGCAAGTGACAACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAGAGCCTGGACAAATGGCTTCATGCAGAGAAGAAATCGCCTACTGGGTTGAGTTGGCCAACGAGGTTGAATATTGCCATTGGGGCTGCACAAGGTCTGTGTTACATGCACCATGAATGCTCACCCCCCGTCATCCACCGAGATGTCAAATCTAGCAATATACTGTTGGACTCGGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAAATGTTGTCAAAGCCCGGTGAACTAAACACCATGTCTGCTCTAGCAGGCTCTTTTGGCTACATTCCACCAGAATATGCCTATTCAACTAAGATTAACGAGAAAGTTGATGTTTATAGCTTTGGCGTTGTGCTCTTGGAGCTTGTGACAGGAAGGAAGCCTAATATGAGAGGCGAGCATGCATGCAGCTTAGTTGAATGGGCGTGGGAGCATTTTACTGAAGTGAAGAGCCTTACTGATGCATTCGATGAGGACATCAAAGAACCACGCTATGCGGAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCTCCTTGCCCTCAACTAGACCTTCCGCGAAGGAGATTATGCAAGTTCTTCGTCGGTGTTGTCATTCAGGTTCTACTCGCAGAAGAGTGGGAAATGAGTTTGATATCGCTCCTCTACTTGGTGACACAAGGTACGTTTGTAGTTACAAGGAGAGTAATGCTGCAGCCAATAACTCATCCTGTGAAAACACTAATGAAGAAAACTATTTTCACAAGATAAGTGTTCACTAA 3102 0.4665 MSKMPLFVSFHLFLLFTISVPSRVISETEQTILLTLKRQLGDPPSLQSWKPSPSAPCDWTEIGCGSDGAVTNLLLSSKDITTTKSLPSTICNLEHLLMLDLSNNSIAGEFPTALYECSNLQYLDLSQNYLAGAVPADVDRLKTLTFLSLGANSFSGEIPAAIGNLPELQTLHLFKNNFEGTVPKEIGNLSNLQYLGLAYNLKLAPWEIPLEFRKLRNLRRLWMTQCNLIGEIPEYFGDMFTYLKRLDLSKNKLSGSIPRTLFSLRKLRVLYLFSNRLSGVIPSTTMQCLELTEIDFAKNNLTGSIPREFGKLKNLSTLHLYENHLFGEIPVSLSQIPSLKYFRVFSNNLSGTLPPELGLHSKLAAFEVSENQLSGGLPEHLCAGGALIGLVVSSNNFSGPLPEWIVNCPSLATVQVYHNKFSGEVPLGLWTMSNLSSLILSNNSFSGPLPSQIFWNMERIEIANNNFSGGISVGITSAKNLGFLDARNNMLSGEIPRELTQLSKLVALMLDGNQLSGALPSEIISWQSLNTLTLSRNKLSGQIPTAITALPRLAYLDLSQNDISGEIPPQFDRLRFVFLNLSSNQLSGKIPDEFNNLAFENSFLNNLRLCAYNPNIHLDNCLTKTASAAPQSSNSSSNSLALILAATAVVLLAIVSLVFYTLKTQWGKKHCGHKNKVATWRLTSFQRLDLTEINFLSSLTDNNLIGSGGFGKVYRIATNRPGEYVAVKKIWNREDVDYTLEKEFQAEVEILGNIRHSNIVKLLCCYASDNSKLLVYEYMENQSLDKWLHAEKKSPTGLSWPTRLNIAIGAAQGLCYMHHECSPPVIHRDVKSSNILLDSEFRAKIADFGLAKMLSKPGELNTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGRKPNMRGEHACSLVEWAWEHFTEVKSLTDAFDEDIKEPRYAEEMANVFKLGLLCTSSLPSTRPSAKEIMQVLRRCCHSGSTRRRVGNEFDIAPLLGDTRYVCSYKESNAAANNSSCENTNEENYFHKISVH 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00965 1033 Pfam Leucine rich repeat 226 277 IPR001611 GO:0005515
Phco7g00965 1033 SMART LRR_typ_2 502 526 IPR003591 -
Phco7g00965 1033 SMART LRR_typ_2 165 189 IPR003591 -
Phco7g00965 1033 SMART LRR_typ_2 264 288 IPR003591 -
Phco7g00965 1033 SMART LRR_typ_2 312 336 IPR003591 -
Phco7g00965 1033 SMART LRR_typ_2 432 456 IPR003591 -
Phco7g00965 1033 SMART LRR_typ_2 93 117 IPR003591 -
Phco7g00965 1033 SMART LRR_typ_2 550 573 IPR003591 -
Phco7g00965 1033 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Phco7g00965 1033 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 183 281 - -
Phco7g00965 1033 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 283 381 - -
Phco7g00965 1033 FunFam Receptor-like protein kinase HSL1 isoform A 26 180 - -
Phco7g00965 1033 CDD STKc_IRAK 705 974 - -
Phco7g00965 1033 Pfam Leucine Rich Repeat 119 155 IPR001611 GO:0005515
Phco7g00965 1033 Gene3D Transferase(Phosphotransferase) domain 1 779 991 - -
Phco7g00965 1033 ProSitePatterns Protein kinases ATP-binding region signature. 705 729 IPR017441 GO:0005524
Phco7g00965 1033 Gene3D Ribonuclease Inhibitor 25 205 IPR032675 -
Phco7g00965 1033 PANTHER UNNAMED PRODUCT 207 907 - -
Phco7g00965 1033 SUPERFAMILY L domain-like 48 282 - -
Phco7g00965 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Phco7g00965 1033 FunFam Receptor-like protein kinase HSL1 679 778 - -
Phco7g00965 1033 ProSiteProfiles Protein kinase domain profile. 699 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00965 1033 Gene3D Phosphorylase Kinase; domain 1 680 778 - -
Phco7g00965 1033 SUPERFAMILY Protein kinase-like (PK-like) 693 974 IPR011009 -
Phco7g00965 1033 FunFam Kinase family with leucine-rich repeat domain-containing protein 779 990 - -
Phco7g00965 1033 Gene3D Ribonuclease Inhibitor 206 357 IPR032675 -
Phco7g00965 1033 Gene3D Ribonuclease Inhibitor 358 644 IPR032675 -
Phco7g00965 1033 Pfam Protein kinase domain 701 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00965 1033 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 385 625 - -
Phco7g00965 1033 SUPERFAMILY L domain-like 240 599 - -
Phco7g00965 1033 SMART serkin_6 699 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00965 Phco-Chr7 7850424 7854092 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phco7g00965 Pkinase 1.6e-49 CL0016