Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00957 ATGCCTGAGCTGCGTACCCGAACACGCAGAAACCGACTCGTAGACAACGTAAACGCGAACCCAATCATTCAGCCAACCTCGCCGGCGGCCGCCAGAGCTCGAAGGAGGAAGACATCCGCCGCGGCTGCCCAAAGCCGGAGAAACCGGAGGCAGATCAACGCGATCGCTGCCGCCAATGAAATCGTGAACGATTACGCTGGTGTTGTTCGCGAAGCCAGAAATAGAAATATAAATTTGATAGACGAGTTAGGAGAGAAAGAGAATAACAATAATAAGGTTTCGGTTAGGGTTTTTGAAGAGGAAGACATGGATGAAGACGATAGCCGCGGCCGCAGCGCAGATAAGGCTCCGGGAGCTGAAGACGAAGGTAGCACTGCTCCTCTTCCGGAGAAGGTTCAAGTTGGTGGTTCTCCGTTGTATAGAATTGAGAGAAAACTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGTCGGCGGATAGGAGTTGTGAATTCTGGCGAACGGACTGGTGCTGGTGCTGTTGAGGTAGCCTTAAAATTCGAGCATAGAAGCAGCAAGGGGTGCAATTATGGACCACCATATGAGTGGCAGGTTTACAATGTATTAGGCGGTAGTCATGGTGTACCACGAGTGCATTTCAATGGACGGCAAGGTGACTACTATATTATGGTCATGGATATGCTTGGCCCCAGTCTGTGGGATGTTTGGAATAACAACTCACACACCATGTCTACTGAAATGGTTGCATGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCATGGTGATGTGAAGCCTGAGAATTTTTTGCTTGGAACCCCAGGAACTCCAGATGAAAAGAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTAGGTGGCGTGATAGTTCGACTGGCCTTCATGTTGAATATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGTTATGCCAGTGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCTTACACTCTTGTCTTCCTTCTTCGTGGTCGGCTTCCCTGGCAAGGATATCAGGGAGAAAATAAAGGGTTTCTTGTCTGCAAAAAAAAGATGGCCACCTCTCCAGAAACTTTGTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTTTTTGATGGAATTGTGGGCCCAAATCCAGATATCAGGCCAATAAACACCGAGGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGGGGGCGATTGACCATGGAAGAGGATGATGATGAACAACCAAAAAAGAAGGTTCGAATGGGAATGCCTGCTACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGGTTAGCCCAACACATTGATAAAGGGAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCTTGTTCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCCTCCAACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAAAATAATTATTACATTAGTGCCATAGCGGGAGCTCATAATGGAAGCTCATTGGTTGTAATGTCTAAAGGTACCCAGTACTTACAGCAATCCTATAAAGTCAGTGATTCATTTCCATTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCACGTGGGGCTGGTTATTCTGATCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGAAGGTGGGATAACGGTTATCGCATCACCTCAACTGCTGCAACATGGGACCAGGCTGCTCTTGTTCTTAGTGTTCCAAGAAGAAAACCAGCTGATGAAACTCAGGAGACACTACGGACATCTGCTTTTCCTAGTGCTCATGTTAAGGATAAATGGGCAAAGAATCTCTATATTGCATCTATTTGTTATGGGAGAACAGTTTGGGAACTGAAGATGCTCTCTGACCCATTTTCTGAACAATGCAGTTCAGCATTAATCTGTCATGGAAGCACATCTTGGAAGATAACTTCTGTACCTCTTCGATATTGTATATTTCCTGGGTTACTTGGACATGTGAAGCAGATTTTGGTTGGTCCTTGCAATGTTATGTTGCTGGAGCAATCTATATGGTCAAGGAAATCAGAAGCTGTTCAAGGAACTGGTTTTTTTGGAACTATTTGCCGTTGTTTGGACCATATATTTAATTTCCAAGGCTATCGCAACTTGCAGATTTTGGTTGGTCCTTGCAATGTTATGTTGCTGGAGCAACCTATATGGTCAAGGAAGTCAGAAGCTGTTCATGGAACTGGTTTATTTGGAACTATTTGTCATTCAGAACCATTGTTATCGATTGACACTATGAATATCATGTTTTGCTCGAGAGACACCAACCTTTCTACTGATGGTTTATTTGTAATAGTTATTCGGGATGATGCAATGGTATCCACTAAACTGAGTCAGCTGTCTTGCCTTGATGGTGACTATGGAACACATTGA 2673 0.437 MPELRTRTRRNRLVDNVNANPIIQPTSPAAARARRRKTSAAAAQSRRNRRQINAIAAANEIVNDYAGVVREARNRNINLIDELGEKENNNNKVSVRVFEEEDMDEDDSRGRSADKAPGAEDEGSTAPLPEKVQVGGSPLYRIERKLGKGGFGQVYVGRRIGVVNSGERTGAGAVEVALKFEHRSSKGCNYGPPYEWQVYNVLGGSHGVPRVHFNGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGTPGTPDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSSNFLHKEWIMEQWENNYYISAIAGAHNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGTRWAIVMSRGAGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAALVLSVPRRKPADETQETLRTSAFPSAHVKDKWAKNLYIASICYGRTVWELKMLSDPFSEQCSSALICHGSTSWKITSVPLRYCIFPGLLGHVKQILVGPCNVMLLEQSIWSRKSEAVQGTGFFGTICRCLDHIFNFQGYRNLQILVGPCNVMLLEQPIWSRKSEAVHGTGLFGTICHSEPLLSIDTMNIMFCSRDTNLSTDGLFVIVIRDDAMVSTKLSQLSCLDGDYGTH 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00957 890 Coils Coil 69 89 - -
Phco7g00957 890 MobiDBLite consensus disorder prediction 20 48 - -
Phco7g00957 890 ProSiteProfiles Protein kinase domain profile. 140 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00957 890 SUPERFAMILY Protein kinase-like (PK-like) 140 420 IPR011009 -
Phco7g00957 890 CDD STKc_CK1 140 416 - -
Phco7g00957 890 Pfam Protein kinase domain 140 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00957 890 Gene3D Transferase(Phosphotransferase) domain 1 108 463 - -
Phco7g00957 890 PANTHER CASEIN KINASE-RELATED 140 672 - -
Phco7g00957 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Phco7g00957 890 FunFam casein kinase 1-like protein HD16 113 463 - -
Phco7g00957 890 ProSitePatterns Protein kinases ATP-binding region signature. 146 179 IPR017441 GO:0005524
Phco7g00957 890 SMART serkin_6 140 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00957 890 MobiDBLite consensus disorder prediction 91 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00957 Phco-Chr7 7763066 7769873 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Phco7g00957 Pkinase 1.6e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00957 7 7763066 7769873 Phco7g00957 7 7763066 7769873 ECH
Phco7g00957 7 7763066 7769873 Phco2g00873 2 10450130 10454463 PCT