Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00920 ATGGAGAGGGTCATCGGCGGCAAGTTTAAGACTGGTCGGAAAATCGGAAGCGGTTCCTTTGGAGAAATTTATATTGCCTCAAATATGGACACCTCGGAGATTGTTGCCATCAAGATGGAAAGCAAGAAGACCAAACATCCACAGCTATTGTATGAGGCAAAGTTATATAGTATTCTTCAAGGAGAAAGTGGTATTCCAAGTATGAAGTGGTGCGGTACTGATGGAGACAATAATGTTCTGGTCATTGATCTTCTGGGACGGAGTCTTGAAGACTTTTTTGTCTATTGCGGGAGGAACTTTTCATTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTGACAAGAATAGAGTACCTGCATTCCAAGGGATTTTTGCATAGAGACATCAAACCAGATAATTTTCTTATGGGTCTCGGGAGGAAATCAAATCAGGTTTATATTATTGATTTCGGACTAGCAAAAAGATATAGGGATCCAAACACAAATAAGCATATTCCTTACAGAGAGAATAAAAGCTTAACAGGAACTGCACGTTATGCAAGTTGCAACACTCACATGGGAATTGAACAAAGTCGGCGTGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGAAAGCTGCCACCAAAAAGGAAAAATATGACAATATTTGTGACAAGAAGTTATCGACTCCCATTGAGATGCTCTGCAAGTCATATCCTGTGGAGTTTGCTACATACTTTCATTATTGCCAATCTTTGACATTTGATCAACACCCAGATTATGGATACTTGAAGCGCCTGTTTCGTGATTTGTTCAAGCGAGAAGGATATGATTCTGACTATATATATGACTGGACCATCCTAAAATATCAGCAGTTGCGACAGACAAAGAAACAAAATCAATCATCTCCTTCAGCTGCATTGCCTAGCAATCTAGAATCAGCAGTTGTGGAAAACCATAAAGGAGCCAATGATTCAACTCATGTTAATGTAACAAAAATGTTAGCCAGTCTGGAACTCCCAAATGCACGTGTGCAGCCTAAGCCATCTAATGCTCCGAATCTGGATGCCAAGATTCGGACTGAGAAACATGGTGTGAACAATATTCCATCTACTTCCTCTGCCTTGCCCAAATCCTCTTCAAGAAATGTCTCGAAACCAGAAAAGCCCACAGGAACCTCAAACCTTGGTCGTGTATTTGGGAGTAATTCCCGTGCTTCAAGCAGCTGGATTCCTTCACTACGCCGAATTTCTTCGGCCAAATAG 1281 0.4091 MERVIGGKFKTGRKIGSGSFGEIYIASNMDTSEIVAIKMESKKTKHPQLLYEAKLYSILQGESGIPSMKWCGTDGDNNVLVIDLLGRSLEDFFVYCGRNFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKSNQVYIIDFGLAKRYRDPNTNKHIPYRENKSLTGTARYASCNTHMGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDNICDKKLSTPIEMLCKSYPVEFATYFHYCQSLTFDQHPDYGYLKRLFRDLFKREGYDSDYIYDWTILKYQQLRQTKKQNQSSPSAALPSNLESAVVENHKGANDSTHVNVTKMLASLELPNARVQPKPSNAPNLDAKIRTEKHGVNNIPSTSSALPKSSSRNVSKPEKPTGTSNLGRVFGSNSRASSSWIPSLRRISSAK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00920 426 Gene3D Transferase(Phosphotransferase) domain 1 1 341 - -
Phco7g00920 426 MobiDBLite consensus disorder prediction 345 426 - -
Phco7g00920 426 MobiDBLite consensus disorder prediction 370 426 - -
Phco7g00920 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phco7g00920 426 FunFam Casein kinase I isoform delta-like 1 339 - -
Phco7g00920 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Phco7g00920 426 PANTHER CASEIN KINASE-RELATED 9 332 - -
Phco7g00920 426 Pfam Protein kinase domain 9 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00920 426 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00920 426 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Phco7g00920 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00920 Phco-Chr7 7415724 7422816 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phco7g00920 Pkinase 1.8e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00920 7 7415724 7422816 Phco2g00830 2 9546929 9570817 PCT