Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00909 ATGGAACCCAGCGAAACGACTTCGGATTCAGCTCCGCGAAAATTGGTCCGGCAATTGGATTTCACCCTCGTTTATGAAGATCCCCCGCACCTGAAACTGCCTCCTCCGTCACCACCGCAGCATTCGCTTCTGCCACCTCCATCCCATTCTCTGTTGCAGTTGCAGTTAAATTTGCAGTCACCGGGGCAACGCCCGTGGTTATATTCCGAGCCGCAGGAGCAGCAGCCCTGGCTACATTCACCGCGACCGAAGCTAGTTTCGTGGGTTAGTCGATTTCCGCCGGTACAGAAAGTTCCCGTTAAGGTGTTGCCAGTGGTGAAGTCAGATTCTCCTAGATCAAAACCTCGATTTAATGTGGAATCAAAGGACACGACTCCAAAGAAACAGAAACAATGTAACTGCAAAAATTCTAGATGCCTCAAATTGTACTGTGAGTGCTTTGCAGCTGGGATCTATTGTGATGGCTGCAACTGTGTAAATTGTCATAATAATGTGGATAATGAGGCTGCCAGACAGGAGGCAGTTGGAATAACATTGGAACGAAACCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAACAACGAAATTCCAAGGAAAGTGAAGCTCTAGTTATAGGAAAGCACAATAAAGGATGTCACTGCAAGAAATCTGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTACTGAAAGAAGAGCAATTTTTCACAGAGAGTATAATCAAGTTCACATCAAACAGGGAACTAGTGCTGCCGTAACCGAAGTAGTTGGATCATCTGGCTATAGAAACCATATAACACCCAAGAGGAGAAAAATTCAGGAAATGTTTTCTGGAAGGTCAACTGTGGATCAAACTGTTAACACGAATGCCCAATACCTACAGGCAATTGATCGTATGGCTTCACCGTCTTCATCTCTGTCAGATTCCTTTGTTTTTGACCAGGTCAACTCAAGAATTTCAGGGTCTTCAAGGTCGGTATTGGCAGATGTCCTCCAGCCACAAAATGTGAAGAATCTCTGTTCACTTCTTGTTATTCTCTCACGAGTAGCTGCAAAGACAAATGCAGAAACGAGAGAGAAAATAGATCGAAAAACAGAAGCCGGGAACTTTAAAGCTTCCGTTGCTTCATCAGCTAAATCGCTACAAGAAACTAAAGATGTCCGCCAGCCGGTTTGTGATGATCACGTGAATAAAGCTGTGGCAGATGCAGTTGATATTGCCAATTATAACAGGCCATTGTCACCAGAAACACTGGCATTGATGTGTGATGAACAGGACAATATGTTTTTTGGAAATACTTCTGCCGATGGAGCTTCACATCAAAACATGATTCAAAAGTCATTAAATTCTGATTACGGAGAGCAGGAAAGGCTTATAATGACCAAGCTCTTGGATGTTCTTCGCGAACTCGTTACTCTTGGTAGCATAAAAGTTCCACTAACTGATAAATTGGCGAATCCGGTGACGGATCCTTTGTATACAAACTCTCCTCCAACGAGGGAAAGAGAAGAGAAGCTAGTAGAGTTGCTCGAGGATGAGAACTTCTACTTGAATAGAGGAATGCTTGCTTGGTTTGCTGCATTTGCCGCTACTCGCTATGCTCTGGTTGTTAGTATAAAGCCTCTTTTTGAGGATAAGATAACTTCAAATGAGATTTGA 1728 0.434 MEPSETTSDSAPRKLVRQLDFTLVYEDPPHLKLPPPSPPQHSLLPPPSHSLLQLQLNLQSPGQRPWLYSEPQEQQPWLHSPRPKLVSWVSRFPPVQKVPVKVLPVVKSDSPRSKPRFNVESKDTTPKKQKQCNCKNSRCLKLYCECFAAGIYCDGCNCVNCHNNVDNEAARQEAVGITLERNPNAFRPKIASSPQEQRNSKESEALVIGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSTERRAIFHREYNQVHIKQGTSAAVTEVVGSSGYRNHITPKRRKIQEMFSGRSTVDQTVNTNAQYLQAIDRMASPSSSLSDSFVFDQVNSRISGSSRSVLADVLQPQNVKNLCSLLVILSRVAAKTNAETREKIDRKTEAGNFKASVASSAKSLQETKDVRQPVCDDHVNKAVADAVDIANYNRPLSPETLALMCDEQDNMFFGNTSADGASHQNMIQKSLNSDYGEQERLIMTKLLDVLRELVTLGSIKVPLTDKLANPVTDPLYTNSPPTREREEKLVELLEDENFYLNRGMLAWFAAFAATRYALVVSIKPLFEDKITSNEI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00909 575 PANTHER TESMIN/TSO1-RELATED 24 491 IPR028307 -
Phco7g00909 575 SMART CXC_2 127 167 IPR033467 -
Phco7g00909 575 SMART CXC_2 210 251 IPR033467 -
Phco7g00909 575 MobiDBLite consensus disorder prediction 27 48 - -
Phco7g00909 575 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 213 247 IPR005172 -
Phco7g00909 575 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 129 164 IPR005172 -
Phco7g00909 575 MobiDBLite consensus disorder prediction 29 45 - -
Phco7g00909 575 ProSiteProfiles CRC domain profile. 128 250 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00909 Phco-Chr7 7302303 7314201 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Phco7g00909 TCR 3e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00909 7 7302303 7314201 Phco7g00909 7 7302303 7314201 ECH