Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00896 ATGTTTGCAGTTACACCATATTCTCCGACGACCACGCCGGTTGACGTCATCCCTCCGCCGTTTCCGCTACCAGCACTGCCCCCATTCCATTACCCGCCGTCGCCATCGATGTTTCCGACGCCTCTAGCCCCGTCCTCGCCTTCGCCGGAAACTTTACTCGTCAAAGTTTTGCCGCCACCGCCATCTTCAGTTACGCATATTCCTCTGACGGTGCCGTTGTTGCCGTCTCCGTCGCCGGAATCTCTCACACCGCCATTTCCGCCGTTCGGAGTTTCACAATCGCCTCCGGTTCTAACCGCCGCATCCCAGCCACCGCCGTTTCCTTATGCCACGGCGCCTTCAACGACGTCGTTTCCGCCGTTTGCAGTTGCGCCTTCGCCTCCGTCTCCGACCGCCAATTTTCCACCTGCATTGCCAGATATGCCTCTGGCACCGGAAGCGGTGACGACGTCGACTGTTCCTCCACCGCCTTTACCTCCTTCGTTCACGACGGAACCAACCTTGGCAACGCCGTGGAGCCCCGCGTTGCCGTTATCGGCGCCGGAAGTGAATTTGCCGGTGGCTGTGGATTTTCGGAAAGCCTCAACATTCCACGTGTCAAGTGGGCTCATTTCTGGGCTTGTAATTGGAGCAATCGTTTTGGGGTTTGTTTTTAGTATTGGATTAGTTCTATGCAGGAATAGGAAGAAAAACAAACAAAAGAATCTATGCACGCGTCGCTCTAAGGAATTACCACCGTCCGTTGAATCCAAGGGATCTCATGTTATTCGAGTGCCATCAAATCCAACGCTGCCATCACATCCCACGTCAGGTTCTTTTACTTCAGTGTCTGTGAAAGCAATTCCAAACCATGCTCCAAGAGCAGCCTTCGGTCCTGGGAATGATATTTTCACGTATGATGAAATATTGGTGGCCACTAGTTGTTTCTCTGAGTCCAACCTTCTTGGAGAAGGTGGCTTTGGCTATGTGTACAAAGGAGTTCTCCCGTGTGGAAAGCAAATTGCGGTTAAGCAGCTAAAATCAGGAAGCCAACAAGGAGAGAGAGAATTTCAAGCTGAGGTGGAGACAATTAGCCGAGTGCATCATAAGCATCTTGTTGAATTGGTTGGCTACTGCGTTATTGGGGCAGAGAGAATGCTTGTTTATGAATTTGTTCCCAATAACACATTGGAATTTCACTTGCATGGGGAGGGGAATATCTTCTTAGGATGGACAACGAGAATTAAAATTGCCCTAGGATCTGCAAAAGGGCTGGCATATCTACATGAAGATTGTAATCCCGCAATTATTCACCGTGATATTAAAGCATCTAATATTCTTCTTGATTTTAAGTTTGAACCCAAGGTTTCTGACTTTGGCCTGGCAAAAATCTTACCAAACACCGATAGTCGCATTAGTCACCTCACCACCCGAGTGATGGGAACATTTGGATATCTGGCTCCGGAGTATGCATCAAGTGGTAAATTGACAGATAAATCAGACGTATATTCCTACGGCATCATGCTTTTAGAACTTATAACCGGACGTCCACCAATCACTGCAGCAGGATCAGGGAATGAGAGCTTGGTTGACTGGGCTAGACCATTGCTTGCTCGAGCACTACAATATGATAACTTCGACCTTGTTGATCCAAGGTTGCAGCAAAATTACGATGCCGATGAGATGATTAGAATGATTACATGTGCAGCTGCTTGTGTGCGCCAGTCATCCACACTTCGACCTCGTATGAGTCAAATTGTTGGAGTCTTAGAAGGAGTGGTTTCTCTTTCTGATCTTGTTGAAGATGTTACACCGGGACATACTACAGTACACAATTGGTCAAATTATTTAGATTATGGTGCCAACCAAGACCAGCAGGACTTCAGAAGTTACGATTTGGCATTATCATCTCAGAAATACAGCTCCAGTGGGTACATTGAAACAACTAGTGCTTGTGGCCTTTACTCATCAGGCTCAGGTAGTGAGGCTCACCAATCATTTCGAGACATAATATAA 1995 0.4777 MFAVTPYSPTTTPVDVIPPPFPLPALPPFHYPPSPSMFPTPLAPSSPSPETLLVKVLPPPPSSVTHIPLTVPLLPSPSPESLTPPFPPFGVSQSPPVLTAASQPPPFPYATAPSTTSFPPFAVAPSPPSPTANFPPALPDMPLAPEAVTTSTVPPPPLPPSFTTEPTLATPWSPALPLSAPEVNLPVAVDFRKASTFHVSSGLISGLVIGAIVLGFVFSIGLVLCRNRKKNKQKNLCTRRSKELPPSVESKGSHVIRVPSNPTLPSHPTSGSFTSVSVKAIPNHAPRAAFGPGNDIFTYDEILVATSCFSESNLLGEGGFGYVYKGVLPCGKQIAVKQLKSGSQQGEREFQAEVETISRVHHKHLVELVGYCVIGAERMLVYEFVPNNTLEFHLHGEGNIFLGWTTRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFKFEPKVSDFGLAKILPNTDSRISHLTTRVMGTFGYLAPEYASSGKLTDKSDVYSYGIMLLELITGRPPITAAGSGNESLVDWARPLLARALQYDNFDLVDPRLQQNYDADEMIRMITCAAACVRQSSTLRPRMSQIVGVLEGVVSLSDLVEDVTPGHTTVHNWSNYLDYGANQDQQDFRSYDLALSSQKYSSSGYIETTSACGLYSSGSGSEAHQSFRDII 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00896 664 FunFam proline-rich receptor-like protein kinase PERK8 385 598 - -
Phco7g00896 664 Gene3D Transferase(Phosphotransferase) domain 1 385 596 - -
Phco7g00896 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Phco7g00896 664 MobiDBLite consensus disorder prediction 254 271 - -
Phco7g00896 664 FunFam Proline-rich receptor-like protein kinase PERK8 282 384 - -
Phco7g00896 664 SUPERFAMILY Protein kinase-like (PK-like) 291 583 IPR011009 -
Phco7g00896 664 CDD STKc_IRAK 315 585 - -
Phco7g00896 664 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 216 615 IPR047117 -
Phco7g00896 664 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Phco7g00896 664 Gene3D Phosphorylase Kinase; domain 1 276 384 - -
Phco7g00896 664 Pfam Protein kinase domain 310 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00896 664 SMART serkin_6 309 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00896 664 ProSiteProfiles Protein kinase domain profile. 309 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00896 664 MobiDBLite consensus disorder prediction 234 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00896 Phco-Chr7 7173902 7178106 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phco7g00896 Pkinase 2.7e-44 CL0016