Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00876 ATGCAAAAGGAAAAGGAAGCCATTATCAAGGAGGGAACGGATACAGAAATGGAAGGAACTCATGCAAAAGAGGAAACCCTACCACCGGGATTCCGATTTCATCCTACCGATGAAGAACTTGTCACTTGCTATCTCCTAAATAAGATATCGGATTCTAATTTTACAGGCAGAGCAATAACTGATGTAGATCTCAACAAAAGTGAGCCATGGGAGCTTCCAGGGAAAGCTAAGATGGGTGAAAAAGAATGGTACTTCTTCAGTCTGAGAGACCGTAAATACCCAACTGGTGTGAGAACCAATCGAGCAACGAACACGGGGTATTGGAAGACAACAGGGAAAGACAAGGAGATCCTCAACAGTGCAACATCGGAATTGATTGGCATGAAGAAGACTTTGGTTTTCTACAAAGGAAGAGCACCCAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATACCGTATGCACTCAAAATCCACCTTCAGAACTACCAGGCAGGATGAATGGGTGGTTTGCAGGGTGTTCAAGAAGAGTGGAGGGACAAAAAAGTTCCCTTCTTCCAACCATGCAAGAGCAGTGAATCCGTACAGCTTGGAAATAGGGCCAAATATTATGGCACCACCAGTGATGCAATTAGGAGATCCTGCAGCTCATTTCCTTTATGGACGGAACTACATGAGCAGTGTTGAGTTAGGTGAACTTGCAAGGGTTTTAAGAGGAAGTGGATCAACAAGTAGTGTCAATCAACCAATGCAATCCCAATTGGGCTACCCTACATCAGCAGCAGCAGCAGCAGGAGGATTCACCATTTCAGGACTCAATTTGAACCTGGGAGGAGGAGGAGGAGGAGCAACAAGCACAACACAACCCATTTTTCGACCAATGCAACCTTCTTCTGCTCCTCCTGTTCATACAATGGCTCAAGTAGTTGATGTGAATTCCAGCATGATGACAACTGGTTCTCTTGGTGCAGATGTAGGTTATGGACCAGAAATGAGTAACATGAATTCTCATGGGAATAGGTTTATGGGAATGGAGCATTGCATGGATCTAGAAAACTATTGGCCTTCCTACTAA 1074 0.446 MQKEKEAIIKEGTDTEMEGTHAKEETLPPGFRFHPTDEELVTCYLLNKISDSNFTGRAITDVDLNKSEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRMHSKSTFRTTRQDEWVVCRVFKKSGGTKKFPSSNHARAVNPYSLEIGPNIMAPPVMQLGDPAAHFLYGRNYMSSVELGELARVLRGSGSTSSVNQPMQSQLGYPTSAAAAAGGFTISGLNLNLGGGGGGATSTTQPIFRPMQPSSAPPVHTMAQVVDVNSSMMTTGSLGADVGYGPEMSNMNSHGNRFMGMEHCMDLENYWPSY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00876 357 Gene3D NAC domain 36 179 IPR036093 GO:0003677|GO:0006355
Phco7g00876 357 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Phco7g00876 357 FunFam NAC domain-containing protein 100-like 36 180 - -
Phco7g00876 357 ProSiteProfiles NAC domain profile. 27 176 IPR003441 GO:0003677|GO:0006355
Phco7g00876 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 237 - -
Phco7g00876 357 SUPERFAMILY NAC domain 20 176 IPR036093 GO:0003677|GO:0006355
Phco7g00876 357 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00876 Phco-Chr7 6972179 6974149 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco7g00876 NAM 4.5e-40 No_clan