Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00863 ATGGCACATAAAGTAGACTACTGCTGTCTTCTCATGCTCTTCTTCACTTGGTTTTTGCCCTCATTGGCTGACAATGCTCAAGTTCTGATGAACTTCAAAAGATTTTTGTCCAATGCTGATGCTTTAAATAACTGGGGGAACCAATCAATTGGTGTGTGCAGCTGGACTGGTATTTTGTGTTTCAATCAAAATTTTCATGGCTTGAGATTAGAAAACATGGGACTAAGTGGCACTGTTGACGTAGACACGCTGCTTCAGTTGACCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGAGTTTAAGGGCGCTGTTTCTGAGCAATAACAAGTTCTCTGGTGAACTTCCAGATGATGCTTTTGAAGGCATGAAACGTCTTAAGAGAGTATTCTTGGCTGAAAATGGGCTCACGGGTCATATTCCTACTTCCTTGGCTAAATTGCCTAATCTTTTGGATGTGGACATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTCAACAGAGGGATTTCAGAGTGTTTAATTTATCTTACAACAAGTTAGAGGGTCAAATACCAGAAAGCTTAAGCAGCAAGGATCCTGGCTCATTTGCTGGCAATCAAGGTCTATGTGGAAAGCCTCTAAGTCCCTGCATTGGAAGCCCCACCTCACCCCCGGACACAGATACCGATGAACACCCAAATTCACATCCAGAAAAAGAAAACAAGGAAAAACGCGTTATTTTAACAGTTATTGTAGTGGCGGGGGTGATTGTGCTGGCCTCAATACTAGCACTTTTGATAATCCGTTACCGTCGAAAGAAACCCGTACTGGTAAAAGAAGCACAACCCCAGAACGTTACTCCTTTTTCTAGCGAGTCCAAATCCATTGTTCTGACAACTGAACCCAAGAAAAGTGAAGAGGGAGGGTTGAACTTCGTTAGGAACGAGAGGGAGGGGATTGACATGCAAGACTTGCTAAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGTTTTGGATCAACGTACAAGGCCATGCTTCTGAACGGACCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAACAACGTGGGGAAGAAAGAGTTTGTTGAGCACATGAACAGGCTTGGAAAATTGTCACACCCCAATCTACTCCCTCTCGTTGCATTCTACTACGGAAAAGAAGAAAAGCTTTTGGTTCATGACTTTGCTGAAAATGGCAGCTTGGCAAGTCATCTTCATGGAAGAAGTGGCGTTGAGTTGAACTGGGGAACTCGTTTGAAGATCATAAAAGGGGTGGCCAGGGGGTTGGCTTATCTGTACACGGAGTTCCCCGACCAAGCTTTACCACACGGTCATCTGAAATCGTCTAACGTTGTACTGGACGGTTCCTTCGAGGCTCGTTTGGCAGAGTACGGCCTTGTGGCGGTGGTGGAGAAGAGCCACGCTCAGCAGTTCATGGTGGCTTACAAGTCTCCGGAGGCGAGCCAGTTGGAGAAGCCTAGCGAGAAGAGCGATGTGTGGTGTCTGGGGATTCTGATACTGGAGCTTTTGACGGGGAAGTTCCCTGCGAATTATCTGAGGCATGGGAAGGGAGCGAGCGAGGATTTGGCGGCGTGGGTGAACTCGATAGTGGGGGAAGGGTGGAGTGGGGAGGTGCTTGATAAGGGGATTCCAGGGAGAGGGAGTGGAGAGGGTGAGATGGTGAAGCTGTTGAGGATTGGAATGGGATGCTGTGAGTGGAAGTTGGAGAGTAGGTGGGGTTGGAAGGAGGCTGTGTCAAAGATTGAGGAGTTGAAGGAGAGTGATGATGGTGGTGAAGGGGACAACCTCAACTCACTGTCTACCAGTCTCGATGACTTCTCTCTCTCACACTCAACTTCATGA 1905 0.4693 MAHKVDYCCLLMLFFTWFLPSLADNAQVLMNFKRFLSNADALNNWGNQSIGVCSWTGILCFNQNFHGLRLENMGLSGTVDVDTLLQLTNLNSFSVINNNFEGPMPEFKKIVSLRALFLSNNKFSGELPDDAFEGMKRLKRVFLAENGLTGHIPTSLAKLPNLLDVDIHGNSFEGNIPEFQQRDFRVFNLSYNKLEGQIPESLSSKDPGSFAGNQGLCGKPLSPCIGSPTSPPDTDTDEHPNSHPEKENKEKRVILTVIVVAGVIVLASILALLIIRYRRKKPVLVKEAQPQNVTPFSSESKSIVLTTEPKKSEEGGLNFVRNEREGIDMQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNNVGKKEFVEHMNRLGKLSHPNLLPLVAFYYGKEEKLLVHDFAENGSLASHLHGRSGVELNWGTRLKIIKGVARGLAYLYTEFPDQALPHGHLKSSNVVLDGSFEARLAEYGLVAVVEKSHAQQFMVAYKSPEASQLEKPSEKSDVWCLGILILELLTGKFPANYLRHGKGASEDLAAWVNSIVGEGWSGEVLDKGIPGRGSGEGEMVKLLRIGMGCCEWKLESRWGWKEAVSKIEELKESDDGGEGDNLNSLSTSLDDFSLSHSTS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00863 634 MobiDBLite consensus disorder prediction 605 634 - -
Phco7g00863 634 Pfam Protein kinase domain 337 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00863 634 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Phco7g00863 634 ProSiteProfiles Protein kinase domain profile. 334 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00863 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 609 IPR046959 -
Phco7g00863 634 SUPERFAMILY Protein kinase-like (PK-like) 338 604 IPR011009 -
Phco7g00863 634 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 81 176 - -
Phco7g00863 634 Gene3D Ribonuclease Inhibitor 133 227 IPR032675 -
Phco7g00863 634 MobiDBLite consensus disorder prediction 614 634 - -
Phco7g00863 634 Gene3D Phosphorylase Kinase; domain 1 301 409 - -
Phco7g00863 634 Gene3D Transferase(Phosphotransferase) domain 1 410 622 - -
Phco7g00863 634 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Phco7g00863 634 MobiDBLite consensus disorder prediction 221 248 - -
Phco7g00863 634 Gene3D Ribonuclease Inhibitor 24 132 IPR032675 -
Phco7g00863 634 SUPERFAMILY L domain-like 24 204 - -
Phco7g00863 634 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00863 Phco-Chr7 6834980 6837360 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco7g00863 Pkinase 4.7e-28 CL0016