Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00860 ATGTGGTTGCCAAAGAATCGGTCAGAGAAAAAGGATGGTGTGAGTGGATTAGTAGCGGTGGCAATTGATAAAAAAAAAGGGAGCCAAACTGCACTCAAATGGGCAGTTGACAATCTCCTCATCAGAAGTGCAACTGTAATTCTCATCCATGTCAAGCTTCTTGCACCAACTCTATCTCCATCACCTTCTCTTTTCGCCCCTAGGATAAGTGCTTTCCTTGGTGATGATAGTTCAGTGGTGGGCAAAGAACACGAATGCCAAAACAAAAATCTTTTCCTCCCATATCGTGTCTTCTGTACGCGAAAAGATATACATTGCAAGGATGTCCTACTAGAAGATTCAGATGTATCCAAAGCTATAACTGAATATGTTTCTCAGACAGGAATTGAGCATCTGGTTCTTGGCTCTTCAGCAAAAACTAGTTTGCTCAAAAGATTCAAGGTATCAGATATTCCAGGAGAAATTTCAAAAGGGGCGCCAGATTTCTGCACCGTCTATGTTATTGCCAAAGGAAAGATTCAAACAATGCGATCTGCTACTCGTCAACCACCGAACATTTTCCCTAAACTGCTCTATCAAGGTAGTGTCAGGTCAAACATTTCAGACCCAAATATGCATTCGGCTCAAAGCATAAAAGAACAAGAACAATCGCTTTCCTTTGATTCTGCATCACAGTATGATGAATCGTTCAGACTAAACATCAGTGGAAACAGGTCACCATTTACTAGGAAACATTACAATGGCAGACACTATGGGGACACTCCCAATTCAGATATGGATATATCCTTTGTAAGCTCTGGAAGGAAAAGCACAGACCGTTTGATCCCTCCATTGAACTTAGATACCGGAATATCCATTCCTCGGCTATCATATAGCTCAGACACAGATGCAAGCTTGAGTTTTGAGTCAATACATAATGGAAGGAAGTCTACGGAATTGAATAGTCCTAATGAATTCACATCGTTCTCATTTGAGAGTGACAAGCAATCATCTTTTACATCACAAGCAGCGGATGACATTGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTGAAGCAGACCATGGAAATGTATAACACGGCTTGTAAAGAAGCACTCACAGCACATCAGAAGGCAGTGGAACTTCAGCAGTGGAAAATAGAGGAAGAGAGGAGAATGGAAGAAATAAGGCTGGCTGAGGAATCAGCACTGGCAAATGCAGAAAAGGAGAAAGCCAAGTCTAAAGAAGCCATTGAGGCTGCTGAAGCACAAAAGAGAATTGCAGAACTGGAAGCACAGAAGAGACTCGATGCAGAAATGAAAGCACTTAGAGAATCAGAAGAGAAAAGAAAAGTGCTTGATGCTTTGGTAAATGTAGATATCAGGTATAGAAAGTACACTATTGAGGAGATTGAAGAGGCAACAAATTTTTTTTCAGAATCCCTTAAAATTGGAGAAGGGGGATATGGTCCCGTTTTTAAGTGCCATTTGGATCACACACCTGTTGCAGTCAAGGTTCTACGCCCAGATGCACAACAAGGAAGATCACAGTTTCAGCGAGAGGTTGAGGTATTGAGCTGCATACGGCATCCAAACATGGTTCTACTCCTAGGAGCATGTCCAGAATATGGATGTCTGGTGTATGAGTATATGGCAAATGGAAGCTTGGACAATTGCCTCTTTCGACAAGGCAACACTCCCCCACTTCCTTGGCAGCTAAGGTTCAAGATAGCAGCTGAGATTGGCACAGGCTTGCTGTTCCTGCACCAGACAAAACCAGAACCTCTGGTGCACAGGGACTTGAAACCAGCCAACATCTTGCTTGACAGAAACTTTGTGTCCAAAATCAGTGATGTAGGTTTGGCCAGGCTAGTTCCACCATCTGTGGCAGACAATGTCACGCAATATCACATGACATCTGCAGCCGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGAATGTTAGGGGTGAAATCAGACATATACTCCCTTGGGATAATTTTTTTGCAACTCTTGACAGCAAAAGCACCTATGGGTTTGACCCATCATGTTGAAAGGGCCATTGAGAAAGGAACTTTAGCTGAGATTTTGGATCCATCACTCTCTGATTGGCCACTAGAGGAGGCCTTGAAATTTGCTAAGTTGGCAGTGCAGTGTGCTGAATTAAGGCGCAAAGACAGACCTGATCTTGGCAAGGTTATCCTACCAGAACTCCACAGACTAAGAAACCTTGCTGAAGATAGTAATCTTATTTCAGCTTTGGGTAAACCTACGAATGTGACCCGAGACAGACAAGTTTCTGTGGTACTGGGAGGAGAGTGTCCTCACCCGGTCTCAGGGGAAATTAGAGCTAACAATTCAGTGTCTTGA 2358 0.4326 MWLPKNRSEKKDGVSGLVAVAIDKKKGSQTALKWAVDNLLIRSATVILIHVKLLAPTLSPSPSLFAPRISAFLGDDSSVVGKEHECQNKNLFLPYRVFCTRKDIHCKDVLLEDSDVSKAITEYVSQTGIEHLVLGSSAKTSLLKRFKVSDIPGEISKGAPDFCTVYVIAKGKIQTMRSATRQPPNIFPKLLYQGSVRSNISDPNMHSAQSIKEQEQSLSFDSASQYDESFRLNISGNRSPFTRKHYNGRHYGDTPNSDMDISFVSSGRKSTDRLIPPLNLDTGISIPRLSYSSDTDASLSFESIHNGRKSTELNSPNEFTSFSFESDKQSSFTSQAADDIEAEMRRLKLELKQTMEMYNTACKEALTAHQKAVELQQWKIEEERRMEEIRLAEESALANAEKEKAKSKEAIEAAEAQKRIAELEAQKRLDAEMKALRESEEKRKVLDALVNVDIRYRKYTIEEIEEATNFFSESLKIGEGGYGPVFKCHLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDNCLFRQGNTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYHMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLLTAKAPMGLTHHVERAIEKGTLAEILDPSLSDWPLEEALKFAKLAVQCAELRRKDRPDLGKVILPELHRLRNLAEDSNLISALGKPTNVTRDRQVSVVLGGECPHPVSGEIRANNSVS 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00860 785 PANTHER OS02G0152300 PROTEIN 18 752 - -
Phco7g00860 785 SMART serkin_6 471 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00860 785 Pfam Protein kinase domain 473 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00860 785 Gene3D Transferase(Phosphotransferase) domain 1 544 750 - -
Phco7g00860 785 Gene3D HUPs 17 168 IPR014729 -
Phco7g00860 785 CDD STK_N 17 171 - -
Phco7g00860 785 Coils Coil 390 442 - -
Phco7g00860 785 FunFam U-box domain-containing protein 51 544 744 - -
Phco7g00860 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Phco7g00860 785 ProSiteProfiles Protein kinase domain profile. 471 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00860 785 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 543 - -
Phco7g00860 785 Gene3D Phosphorylase Kinase; domain 1 450 543 - -
Phco7g00860 785 Pfam Universal stress protein family 18 145 IPR006016 -
Phco7g00860 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Phco7g00860 785 SUPERFAMILY Protein kinase-like (PK-like) 454 729 IPR011009 -
Phco7g00860 785 Coils Coil 337 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00860 Phco-Chr7 6816834 6821491 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco7g00860 Pkinase 1.8e-40 CL0016