Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00830 ATGGCCATTCTGCACTGCACCCCACTTCCATTTCTTTCCCTCAGAACCACCCTCTATTCCTCCAAGTCCACGTTAACCTCAACATTCACAAACTCAACAACAAGAACAAGAAATCCGTTGTTCATGGCGATGAACACGTTCTCGAAATCCGAACCCGTGTCGTCTTCGGCCTCTTCTTCATCAAGGTACGAGGTGCCGGAGTTAGCTGCTAACGACATGGACAGCGTAACAGACAACACGTTTCGAAGGTATACGTGGAACACCAAGAGGAGTGGCAAAGGAACGGCCATTGTGTGGTTCAGGAATGATCTCAGAGTTTTGGATAATGAGGCTCTCTACATAGCATGGCTTTCCTCCGAAACCGTGTTACCTGTCTACTGCGTTGACCCGAGACTCTTTGCCACTACTTATCATTTCGGCTTCCCCAAAACCGGTGCATTGAGAGCGCAATTTCTCCTTGAATGCTTGGTTGACTTGAGGAAGAATTTGATGAAAAAGGGACTTAATTTGCTTGTACAACATGGGAAGCCTGAGGAGATTCTTCCTTCTCTTGCCAAAGCATTTCAAGCTCACACAGTGTATGCGCAGAAAGAAACGTGCAGTGAGGAGCTGAATGTTGAAAGGTTAGTCATGGTAGGTCTTAAACAAGCTGTGTCATCACCAGAAGAATCCAGTGGTGTCACAGATTCAAACAAGATCACTAAATTGCAATTAGTTTGGGGTACCACCATGTACCATCTTGATGACCTCCCTTTTGATGCCTCTTCTTTGCCAGATATGTATACTCAATTTCGCAAGATTATTGAAGCCAAATGTACCATACGCCCCTGCATCAAACTACCACCATCTCTTGGACCACCTCCCTTAATTGAGGATTGGGGATGCCTTCCTTCATTAGAGCAGCTTGGACTTTGCTCACAGAATGTTATCAAGGGAATGAAGTTTGTGGGGGGTGAAACTGCGGGATTGAGCAGAGTATATGAATACTTCTGGAAGAAGGATTTGCTGAAGGTATATAAAGAGACCAGGAATGGGATGTTAGGGCCTGATTATTCTACCAAATTCTCACCATGGCTTGCCTCAGGATGTTTGTCTCCTCGTTTCATATATGAAGAGGTGAAGAGATATGAGAATGAAAGACTAGCAAATAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTTAGGTTTTTGTCAGTGAAATATGGGAATTCGCTTTTCCATCTAGGTGGCCCTAGGAAAGTTCATCGCAACTGGAGCCAAGACAAGAGTTTGTTTGATTCCTGGAGAGATGGTTGTACGGGGTATCCTCTCATAGATGCCAACATGAAAGAACTATCGACTACAGGGTTTATGTCTAATCGAGGACGGCAGATAGTGTGTTCCTTTCTTGTTCGCGATATGGGCATAGATTGGCGCATGGGAGCAGAATGGTTTGAGACATGTCTTTTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTACGGATCAGGGGTTGGGAATGATCCGAGAGAAGATCGATATTTCAGCATCTCAAAACAAGCACAAACATATGACCCTGAAGGTGAGTATGTTGCTTACTGGTTGCCACAGTTGCGAAAAATCCAAAAGGAGAAAAGGAACTTCCCTGGAAATATGTACATTCCTCAAATTGTGCCTCTCAAGTTTGGAACAGCTAGTGGAAGCAACAAGGACAGTTCCCTTGGTGCAAGAAGAAGCAACCATAGAGGAAATGAAAGAAAATGGAACAGAAGATAA 1776 0.4409 MAILHCTPLPFLSLRTTLYSSKSTLTSTFTNSTTRTRNPLFMAMNTFSKSEPVSSSASSSSRYEVPELAANDMDSVTDNTFRRYTWNTKRSGKGTAIVWFRNDLRVLDNEALYIAWLSSETVLPVYCVDPRLFATTYHFGFPKTGALRAQFLLECLVDLRKNLMKKGLNLLVQHGKPEEILPSLAKAFQAHTVYAQKETCSEELNVERLVMVGLKQAVSSPEESSGVTDSNKITKLQLVWGTTMYHLDDLPFDASSLPDMYTQFRKIIEAKCTIRPCIKLPPSLGPPPLIEDWGCLPSLEQLGLCSQNVIKGMKFVGGETAGLSRVYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGCLSPRFIYEEVKRYENERLANSSTYWVLFELIWRDYFRFLSVKYGNSLFHLGGPRKVHRNWSQDKSLFDSWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSISKQAQTYDPEGEYVAYWLPQLRKIQKEKRNFPGNMYIPQIVPLKFGTASGSNKDSSLGARRSNHRGNERKWNRR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00830 591 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 412 566 - -
Phco7g00830 591 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 94 236 IPR006050 -
Phco7g00830 591 Gene3D - 242 411 - -
Phco7g00830 591 NCBIfam DASH family cryptochrome 95 537 IPR014133 GO:0003913|GO:0006281
Phco7g00830 591 PRINTS DNA photolyase signature 497 511 IPR002081 -
Phco7g00830 591 PRINTS DNA photolyase signature 458 476 IPR002081 -
Phco7g00830 591 PRINTS DNA photolyase signature 438 454 IPR002081 -
Phco7g00830 591 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 93 292 IPR036155 -
Phco7g00830 591 Gene3D HUPs 60 241 IPR014729 -
Phco7g00830 591 PANTHER CRYPTOCHROME 94 552 IPR002081 -
Phco7g00830 591 Pfam FAD binding domain of DNA photolyase 391 547 IPR005101 -
Phco7g00830 591 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 311 547 IPR036134 -
Phco7g00830 591 Pfam DNA photolyase 96 276 IPR006050 -
Phco7g00830 591 MobiDBLite consensus disorder prediction 568 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00830 Phco-Chr7 6553717 6557861 Dispersed/Transposed