Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00811 ATGCACTCCAAATCGGCGCAGTCATCGTTTCGGGATCGGACGCTTGAATTTCATAGCATTGCGGAGAGTTTGAAGAAGCCGGGATCAGCGCCGAATGGACAAAGCAGCAATTTATCCAGATTGGAGGAACAGCGATCGGCAATTGCAAATCAATCGGAGTTCAACAGAAGAGCTTCCAAGATTGGCTTCGGGATTCACCAAACGTCTCAGAAGCTCGGCAAGCTTGCCAAGTTGGCTAAGAGGACTTCGGTTTTCGATGACCCTACCATGGAAATCCAAGAGCTTACGGGGGTTATTAAGCAAGATATTACTGCGTTAAACTCTGCGGTTGTGGATCTTCAGTTGCTTTGCAACTCTAGGAACGAGAGTGGGAACGCGTCCACCGACACCACTAGCCATTCAACCACGGTGGTTGATGACCTCAAGACGCGGCTGATGGGCGCCACCAAAGAGTTTAAAGATGTTCTCACCATGCGAACTGAGAACTTGAAAGTACACGAGAATAGAAGACAGCTGTTTTCGGCCTCTGGTTCTAAGGATTCTGCAAATCCTTTTGTCCGGCAACGGCCGTTGGCTACCAGGTCCGCTGCTAGTAGTTCTAATGCCCCTGCTCCACCATGGGCTAGTGGGTCATCTTCATCTCAGTTGCTTGCTAAAAAACAGGTGGATGGGGAGAGTCAACCATTGCTGCAACAGCAGCAACAAGAGGTAGTCCCACTGCAAGATAGCTACATGCAAAGCAGAGCTGAAGCTCTTCAAAATGTTGAGTCCACTATTCATGAGCTTAGCAACATCTTTAATCAACTAGCAACACTTGTTTCCCAACAAGGAGAAGTTGCCATCAGGATTGATGAAAACATGGATGATACATTGGCAAACGTAGAGGGGGCGCAAGGGGCTTTGTTGAAGTATCTGAACAGCATATCTTCTAATAGGTGGTTGATGATAAAGATTTTCTTTGTATTAATATTTTTTCTTATGGTTTTCTTATTTTTTGTGGCATAG 1005 0.4627 MHSKSAQSSFRDRTLEFHSIAESLKKPGSAPNGQSSNLSRLEEQRSAIANQSEFNRRASKIGFGIHQTSQKLGKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLCNSRNESGNASTDTTSHSTTVVDDLKTRLMGATKEFKDVLTMRTENLKVHENRRQLFSASGSKDSANPFVRQRPLATRSAASSSNAPAPPWASGSSSSQLLAKKQVDGESQPLLQQQQQEVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00811 334 Gene3D - 45 297 - -
Phco7g00811 334 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Phco7g00811 334 SMART tSNARE_6 237 304 IPR000727 -
Phco7g00811 334 SUPERFAMILY t-snare proteins 51 297 IPR010989 GO:0016020|GO:0016192
Phco7g00811 334 ProSitePatterns Syntaxin / epimorphin family signature. 248 287 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phco7g00811 334 PANTHER SYNTAXIN 47 326 IPR045242 -
Phco7g00811 334 MobiDBLite consensus disorder prediction 21 40 - -
Phco7g00811 334 Pfam SNARE domain 279 330 IPR000727 -
Phco7g00811 334 MobiDBLite consensus disorder prediction 190 232 - -
Phco7g00811 334 CDD SNARE_syntaxin5 245 323 - -
Phco7g00811 334 MobiDBLite consensus disorder prediction 192 232 - -
Phco7g00811 334 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 242 304 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00811 Phco-Chr7 6360177 6365170 Tandem