Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00800 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACTAGCAACACTGTCAACCAGGCTTTGGTGCTTCATGACTTTCTGGGCATGAAGCCAACCACTGATTCTCCCAAAACCACCGATGTAAGGTTGTCGGAACCGTCAGCCTCCGCCTCCTCCGCAGGTGGACGTGGCCCTTTCTCTGCCACCTCCGACATCGCTTCTGAGAAGCAGGTAGGAAACCATCTTGAGGGAGTTCCTTTCTATGGCCCAAGGAGTGATCTTTCTGGTACTGAGATCTGTAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCCGCTTTTACGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTATCAAAATTCACATTTGATGAAGGTCCTCCGGAATGCAGCTGGAGGAGATAGGTCTAGAAGGCCCAGTGAGGATGAAGTGTTACTTGGTATGCAGTCAATGAAACAATCTTCTCAGATATTTCAGCCTCCCTCCAGCTCTAAGATTGATGCCAATAAGTGGGAACGATCTATTCTCATGAACGTTGGCCCTTTGCAGCATCCACCCCGCGGAGGGCAATTGGCACCTTTTGTCCACCAAATGGCCTCAAGCAAGATTAGGGATACCAATGCTGGTCCTTCATTCATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTATAAACGCAGCTGCTATGGGCACTGAGAAAACTCCATCTGCTGTGATGCTCGGTGGCAGCAGGCCAAAGGCTGGAAGTAATATCATAGAATCATCCACACCTCCAAGCAGTCAACCCGCCCTAACTTCTGCCAGCCGTCAGATGACTATTTTTTATGGTGGCCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGGCAGATGTTATAATGGCTTTGGCCGGGTCAAATGGTGGATCTTGGTCGACTGCGTTCTCACCTAAATCTGCTGTAAAAATGGTTAATGATGGGAACTTGCACAGTGGAGAAAATGAAACAGGTGTAGTGAATAATGCAGCATTCCCTCAGGAGCTTCATGGGAAATTGTCTATTACTGGAAGTTCTAGTCATGCAATGGGGTCTGGTGATCGAGTAACTACTCCTGCAGGGGCACACCAAGGTAGCGTTTTTGCTAAAGATACCAGAAATCCAGTCCAAGCATCAGATCCCAGTTCAGAAGACAAAAGAGGACAGTGA 1239 0.4778 MAVLLRMAQPHNGNTSNTVNQALVLHDFLGMKPTTDSPKTTDVRLSEPSASASSAGGRGPFSATSDIASEKQVGNHLEGVPFYGPRSDLSGTEICNRLVGSKRSNSDSAFTGSSRDAFQMVPDSYQNSHLMKVLRNAAGGDRSRRPSEDEVLLGMQSMKQSSQIFQPPSSSKIDANKWERSILMNVGPLQHPPRGGQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINAAAMGTEKTPSAVMLGGSRPKAGSNIIESSTPPSSQPALTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGNLHSGENETGVVNNAAFPQELHGKLSITGSSSHAMGSGDRVTTPAGAHQGSVFAKDTRNPVQASDPSSEDKRGQ 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00800 412 SMART tify_2 282 317 IPR010399 -
Phco7g00800 412 Pfam tify domain 284 316 IPR010399 -
Phco7g00800 412 MobiDBLite consensus disorder prediction 35 64 - -
Phco7g00800 412 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 97 357 IPR040390 -
Phco7g00800 412 ProSiteProfiles Tify domain profile. 282 317 IPR010399 -
Phco7g00800 412 MobiDBLite consensus disorder prediction 365 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00800 Phco-Chr7 6248527 6255610 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phco7g00800 tify 2.6e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00636 2 6362751 6366990 Phco7g00800 7 6248527 6255610 PCT