Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00770 ATGGAAGCGAGTGCGGGAATGGTCGCTGGCTCGCACAAACGAAACGAGCTCGTTCGGATTCGCCACGATTCTTCTGACAGCGGGTCTAAACCCCTAAAGAGCTTGAATGGGCAAATCTGTCAAATATGCGGTGATACTGTTGGATTGACTGCGACTGGTGATGTGTTTGTTGCTTGCAACGAGTGTGCCTTTCCTGTGTGTCGTCCTTGTTATGAATACGAGCGAAAGGATGGGAACCAGTCTTGTCCACAGTGCAAGACTAGATACAAGAGGCACAGAGGGAGTCCTCGAGTAGAGGGAGATGAAGATGAAGTTGACTCTGATGACATAGAGAATGAGTTCAATTATGCCCCGGGAACAGCCAAGGCCAGGCGGCAGTGGGAGGAAGATGCTGACCTTTCATCGTCTTCTAGACGTGAGGCTCAACAGCCAATTCCCCTCCTCACCAACGGCCAAACGATTTCTGGTGAGATTCCATGTGCCACACCCGATACTCAATCTGTGCGAACTACTTCAGGTCCTTTGGGCCCATCTGAAAAGGTTCACTCACTCCCCTATATTGATCCAAGGCAACCAGTTCCTGTAAGAATTGTGGACCCATCAAAGGACTTAAATTCTTATGGTCTGGGAAATGTTGACTGGAAAGAAAGGGTTGAAGGTTGGAAGCTCAAGCAGGAGAAAAATATGGTACAAATGACCGGTAGATATGCCGAAGGGAAAGGAGGAGATGTTGAAGGGACTGGTTCTAATGGAGAAGAACTCCAAATGGTTGACGATGCTCGACAACCCATGAGTCGTGTGGTGCCAATTTCTTCATCTCAGCTGACACCTTATCGTGTTGTTATAGTACTCCGGTTGATTATTCTTGGCTTCTTCTTACAATATCGTGTAACACACCCTGTGAAAGATGCATACCCACTGTGGTTGACATCAGTTATTTGTGAGATTTGGTTTGCCTTATCCTGGATACTGGATCAGTTTCCAAAATGGTCACCAGTTAATCGTGAGACTTATCTAGAACGGCTTGCTTTAAGATATGATCGTGAAGGAGAACCGTCACAGCTAGATCCTGTTGATGTGTTTGTGAGTACAGTGGACCCCCTCAAAGAGCCACCTCTTGTAACTGCAAACACAGTGTTGTCTATACTTTCTGTTGATTACCCTGTGGACAAAGTTTCCTGCTACGTATCAGATGATGGTTCAGCTATGTTGACATTTGAAGCACTGTCAGAAACAGCTGAGTTTGCAAAGAAATGGGTGCCCTTCTGCAAAAAGCACAATATTGAACCAAGAGCTCCAGAGTTTTATTTTGCCCAGAAGATTGATTACTTGAAGGACAAGATTCAACCCTCATTTGTAAAGGAGCGACGAGCAATGAAGAGAGAATATGAAGAATTCAAAGTACGGATCAATGCCCTTGTAGCCAAAGCTCAGAAGACGCCAGAGGAAGGTTGGACAATGCAGGATGGAACTCCTTGGCCTGGAAATAATCCCAGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGGCTGGATACAGATGGAAATGAGCTTCCTAGACTTGTTTATGTGTCTCGTGAGAAGCGACCAGGCTTCCAACATCACAAGAAGGCTGGAGCTATGAATGCATTGATTCGCGTTTCTGCTGTCTTGACCAATGGTGCATATCTTCTGAATGTGGATTGCGATCATTATTTCAATAATAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGATCCTGTTATTGGAAAGAAGACATGCTATGTGCAATTTCCTCAGAGGTTTGATGGCATTGACTTGCATGATAGATATGCCAATCGCAATATTGTGTTCTTTGATATCAACATGAAAGGTCAGGATGGTGTTCAGGGTCCAGTCTATGTGGGAACTGGTTGTTGTTTCAACAGGCAGGCTTTGTATGGTTATGATCCTGTTCTGACTGAGGAAGATTTGGAACCTAACATTATTGTGAAGAGTTGTTGGGGTTCTAGAAAGAAGGGAAGGGGTGGGAATAAGAAGTACATTGACAAGAAGAGGGCGATGAACAGAACTGAATCTACAGTTCCCATATTTAATATGGAAGACATAGAGGAGGGTGTTGAAGGTTATGACGATGAAAGGTCACTGCTTATGTCTCAAAAGAGCTTGGAGAAGCGTTTTGGTCAGTCTCCAGTTTTTATTGCTGCCACTTTCATGGAGCAGGGTGGCATTCCACCTTCAACAAATCCTGCAACTCTTCTTAAGGAAGCAATCCACGTTATCAGCTGTGGTTATGAAGACAAGACTGAATGGGGCAAAGAGATTGGATGGATCTATGGTTCGGTGACAGAAGATATCTTGACTGGGTTTAAGATGCATGCTCGTGGTTGGATTTCCATCTATTGCATGCCACCTCGCCCAGCATTTAAGGGTTCTGCTCCTATCAATCTTTCAGATCGTCTCAATCAGGTGCTTCGGTGGGCATTGGGTTCAATTGAGATTTTCCTAAGCAGGCATTGTCCCTTGTGGTATGGCTACAATGGAAGGTTGAAGCCTCTGATGAGACTCGCTTATATTAACACCATTGTCTACCCCTTTACCTCACTCCCATTGATTGCTTACTGTACGCTTCCTGCATTTTGTCTCCTCACAAATAAATTTATTATTCCTGAGATAAGCAACTTTGCCAGCATGTGGTTCATTCTCCTCTTCGTTTCCATTTTTACTACTTCAATTCTTGAGCTTAGGTGGAGTGGGGTCAGCATAGAAGACTGGTGGAGAAATGAACAATTCTGGGTTATCGGTGGGACATCTGCACATCTCTTTGCTGTGTTTCAGGGGCTTCTAAAAGTGCTTGCTGGGATAGATACAAATTTTACTGTTACATCAAAGGCATCGGATGAGGATGGGGATTTTGCCGAGCTCTATGTGTTTAAATGGACATCACTTCTCATCCCTCCTACAACGGTGCTTATTGTGAATTTGGTAGGGATTGTGGCTGGTGTGTCCTATGCCATAAACAGTGGTTACCAGTCTTGGGGTCCACTATTTGGCAAGCTGTTCTTTGCTATCTGGGTCGTTGCCCATCTTTACCCATTCTTGAAGGGTCTCTTGGGCAGGCAAAATCGTACCCCAACCATTGTTATTGTCTGGTCGGTTCTTCTTGCTTCAATATTCTCCTTGCTGTGGGTGAGGATTGATCCCTTCACCTCTGACTCCAACAGATTAACCAATGGTCAATGTGGCATCAACTGTTAG 3255 0.447 MEASAGMVAGSHKRNELVRIRHDSSDSGSKPLKSLNGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHRGSPRVEGDEDEVDSDDIENEFNYAPGTAKARRQWEEDADLSSSSRREAQQPIPLLTNGQTISGEIPCATPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMVQMTGRYAEGKGGDVEGTGSNGEELQMVDDARQPMSRVVPISSSQLTPYRVVIVLRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFALSWILDQFPKWSPVNRETYLERLALRYDREGEPSQLDPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKTPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGGNKKYIDKKRAMNRTESTVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKPLMRLAYINTIVYPFTSLPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVVAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRIDPFTSDSNRLTNGQCGINC 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00770 1084 MobiDBLite consensus disorder prediction 91 143 - -
Phco7g00770 1084 SUPERFAMILY Nucleotide-diphospho-sugar transferases 376 658 IPR029044 -
Phco7g00770 1084 ProSiteProfiles Zinc finger RING-type profile. 40 86 IPR001841 -
Phco7g00770 1084 MobiDBLite consensus disorder prediction 14 28 - -
Phco7g00770 1084 MobiDBLite consensus disorder prediction 164 187 - -
Phco7g00770 1084 CDD mRING-HC-C4C4_CesA 38 88 - -
Phco7g00770 1084 FunFam Cellulose synthase 475 649 - -
Phco7g00770 1084 SUPERFAMILY RING/U-box 25 112 - -
Phco7g00770 1084 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 113 IPR013083 -
Phco7g00770 1084 Coils Coil 456 476 - -
Phco7g00770 1084 FunFam Cellulose synthase 22 113 - -
Phco7g00770 1084 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 262 1051 - -
Phco7g00770 1084 MobiDBLite consensus disorder prediction 1 30 - -
Phco7g00770 1084 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 516 658 IPR029044 -
Phco7g00770 1084 Pfam Cellulose synthase 358 1073 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phco7g00770 1084 Pfam Zinc-binding RING-finger 30 106 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00770 Phco-Chr7 5976619 5982282 Dispersed/Transposed