Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00754 ATGGGAAAACATCGGTCTTTCTTGCATATTGTGGGCACCGTTCTCCTTTTGTGCAAATTTTGTTTAGCTGCGAATCAATATACTGGAAGGGTCTTACCCGGAGTAATAAAGGGTTCTCAAATGAATTGGATTGACAGAGATGGCAAATTCCTCGTGTCAAACGACGGACAATTTTCCTTTGGCTTTGTCACCACAGCGAATGACACCACCTTGTTTCTACTTTCAATCACCCACGTGGCCACTGTCAGGGTCGTTTGGACTGCTAATAGAGCAGTTCCTGTTGCTAATTCCGACAATTTTGTGTTTGATGACAAGGGCAACGCCTTCTTGCAGAAAGATGGAACCGTGGTCTGGTCTACGAACACAAGCGGCAAAGGGGTTTCTTCAATGGAATTGCTTGACACTGGGAATTTGGTTTTGCTTGGGAGTGATAATAGTACAGTGATTTGGCAAAGTTTCGGCCTTCCAACAGATACTTTGTTGCCAACTCAGGAATTCACAGAGGGAATGAAACTCGTCAGTGATCCTAGCAAAAACAACTTGACCCATGTTCTTGAGATCAAGTCTGGTATTGTTGTTCTCTCCGCAAGCTTTCGAACTCCGCAGCCTTATTGGACCATGCAGACGGACAGCCGCAGAACCATCAACAAGGGCGGCGATGAAGTGGCTTCAGCAAACATTAGTAAAAACTCATGGAGGTTCTATGACAAGAGCAAATCGCTGTTGTGGCAGTTCATTTTCTCTTCAGGTCCAGACTCAAATGCTACTTGGATTGCTGTTTTGGGGAGTGATGGCTTCATCACCTTCTCTACCCTCGGCAGTGGAGAGTCAAATGTTGCTTCTGAAAGAATTCCTGAAGATCCTTGCGGTATTCCAGAACCTTGTGAGGCATACTCCATATGCACAGCTAAAAGGTGTAGCTGCCCTTCTGTTATTCCTAGTTGCAAAACTGGTTTTGACTCTCCTTGCGGTGGTGACTCAGAAAAATCCATTCAGTTGGTTAAAGCTGATGATGGACTCGATTACTTTGCGCTTCAATTCCTTCAACCGTTTTCCAAAACCGATTTGGCTGGTTGCCAAACATCTTGCCGTGGAAACTGTTCCTGCGTTGCTATGTTCTTCCACAGAAGTTCGGGAAATTGTTTCTTGTTGGACAGTGTAGGAAGCTTTGAGAAACCTGATTCTGATCCTGGTTATATTTCTTATATCAAGGTCTCGAGTGAAGAAGGTTCTGGCTCGGGTTCTGGGGGCGGCGGAAGTGGCAATAAGCACACCATAGTTGTTGTGATCATTGTCATAATAACCTTGTTTGTCATTGGCGGTCTGGTCTTTTGGGGAGTTAGATACCAAAGAAGAAAGCAAAGGCTGCCCGAGTCTCCTACAGATGGTTCAGAAGAGGCCAATTTCTTGGAGAATTTAACTGGTATGCCAATCCGTTACAGCTACAAGGACCTTGAAACTGCCACTAATAACTTTTCTGTGAAGCTTGGGCAAGGGGGTTTTGGGTCAGTGTATAAGGGAGTTCTACCAGATGGAACTCAAATAGCAGTGAAGAAATTGGAGAGCATTGGACAAGGAAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGCAGCATTCATCACCTCCATTTGGTTAGGCTTAAGGGATTCTGTGCTGATGGAACTCACAGGCTTCTTGCTTATGAGTACATGCCTAATGGCTCCTTGGATAAATGGATATTCAAGAAAAACAAAGGCGAGTTTCTGTTGGATTGGGATACCAGGTTCAACATAGCTCTGGGAACAGCAAAAGGGCTTGCTTATCTGCACGAAGATTGTGACTCCAAGATTGTTCACTGTGACATCAAACCAGAAAATGTTCTGCTGGATGAACACTTCATGGCCAAGGTTTCGGATTTTGGGCTGGCTAAGCTCATGAACCGAGAACAAAGCCATGTTTTCACAACACTGAGGGGCACCAGGGGCTATCTTGCGCCGGAGTGGATAACAAACTACGCTATATCAGAGAAAAGTGATGTTTACAGCTATGGGATGGTGCTGTTGGAGATCATCGGGGGAAGGAAAAACTACGATGCAAGTGAGTCTTCAGAGAAATCCCATTTCCCAACTTTTGCTTTTAAAATGATGGAAGAAGGGAAGCTGAGGGATATTTTTGACTCAGAGTTGAGAATCGACGAGAACGATGACAGGTTTCAATGTGCTATCAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCAATGAGGCCATCTATGAGTAGAGTTGTACAGATGTTGGAGGGTCTTTCTACTGTTCCTAACCCACCAACCACTTCTTTCTTGGGTTCTCGCCTTTACGCCACTGTGTTCAAATCCTCCAGTGAAGGGGCCACCTCTTCTGCTCCCTCCGACTGTAACAGTGATGCTTACCTCTCTGCGGTTCGTCTTTCAGGGCCTAGATAA 2445 0.4507 MGKHRSFLHIVGTVLLLCKFCLAANQYTGRVLPGVIKGSQMNWIDRDGKFLVSNDGQFSFGFVTTANDTTLFLLSITHVATVRVVWTANRAVPVANSDNFVFDDKGNAFLQKDGTVVWSTNTSGKGVSSMELLDTGNLVLLGSDNSTVIWQSFGLPTDTLLPTQEFTEGMKLVSDPSKNNLTHVLEIKSGIVVLSASFRTPQPYWTMQTDSRRTINKGGDEVASANISKNSWRFYDKSKSLLWQFIFSSGPDSNATWIAVLGSDGFITFSTLGSGESNVASERIPEDPCGIPEPCEAYSICTAKRCSCPSVIPSCKTGFDSPCGGDSEKSIQLVKADDGLDYFALQFLQPFSKTDLAGCQTSCRGNCSCVAMFFHRSSGNCFLLDSVGSFEKPDSDPGYISYIKVSSEEGSGSGSGGGGSGNKHTIVVVIIVIITLFVIGGLVFWGVRYQRRKQRLPESPTDGSEEANFLENLTGMPIRYSYKDLETATNNFSVKLGQGGFGSVYKGVLPDGTQIAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCADGTHRLLAYEYMPNGSLDKWIFKKNKGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDEHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDASESSEKSHFPTFAFKMMEEGKLRDIFDSELRIDENDDRFQCAIKVALWCIQEDMSMRPSMSRVVQMLEGLSTVPNPPTTSFLGSRLYATVFKSSSEGATSSAPSDCNSDAYLSAVRLSGPR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00754 814 ProSiteProfiles Protein kinase domain profile. 490 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00754 814 FunFam S-receptor-like kinase 5 565 769 - -
Phco7g00754 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 209 IPR036426 -
Phco7g00754 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Phco7g00754 814 SMART blect_4 42 156 IPR001480 -
Phco7g00754 814 FunFam serine/threonine-protein kinase PBS1-like 459 564 - -
Phco7g00754 814 CDD STKc_IRAK 496 763 - -
Phco7g00754 814 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 771 - -
Phco7g00754 814 PIRSF SRK 4 810 IPR024171 GO:0004674
Phco7g00754 814 Gene3D Phosphorylase Kinase; domain 1 459 564 - -
Phco7g00754 814 Pfam D-mannose binding lectin 84 167 IPR001480 -
Phco7g00754 814 Pfam Protein kinase domain 494 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00754 814 ProSitePatterns Protein kinases ATP-binding region signature. 496 519 IPR017441 GO:0005524
Phco7g00754 814 SUPERFAMILY Protein kinase-like (PK-like) 472 761 IPR011009 -
Phco7g00754 814 FunFam Serine/threonine-protein kinase 38 154 - -
Phco7g00754 814 Gene3D - 42 154 IPR036426 -
Phco7g00754 814 SMART serkin_6 490 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00754 814 CDD B_lectin 44 153 IPR001480 -
Phco7g00754 814 Gene3D Transferase(Phosphotransferase) domain 1 565 769 - -
Phco7g00754 814 ProSiteProfiles Bulb-type lectin domain profile. 36 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00754 Phco-Chr7 5852775 5855219 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco7g00754 Pkinase 1e-52 CL0016