Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00745 ATGGCACAAGATATTGGTACTCCACCAGTTCCTTTTGATTTTGAACTCTTGATTGGTGATCCTGAGAACCTTAGAACTGTCAAAGCCTCATCCAGCAGCACAGACCCATGGATTGAACCTGAAAGGTTAAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGCGATGTTTGGTTAGCAACTCATCATCAATCAACTGAAGATTATGATGAGTATCGTGAAGTTGCTGCCAAGATGTTACCTCCTATCAGAGAGGAACATATGAAGACTGCATTAGAGAAATTTTATGAATTATATTTTCATTGCCAAGGAGCGGCTAGGGTGTGCTGGCTACTTGGGATTTCAATTTTAAATGGAAGGATATGCATCATTATGAATTTTTATGAGGGATCGGTTGGTGATAAGATGGCTAGACTAAGAGAGGGAAGGATTTCATTGGATGATGTTCTTAGGTATGGTATCGATCTGGCTCAAGGTATTCTGGAACTTCACTCAAAAGGGATCCTAGTTCTCAACCTTAAACCATCCAACGTGCTTCTCGATGATACTGATCAAGCAATACTGGGAGATGTTGGTATTCCAAATCTTCTCTTTGGTTCCTCATTCCTAAGCTCAGATACTGCCAATAGGCTTGGTACTCCAAATTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGAGGCCCTGTATCTTTTGAAACAGATTCATGGGGATTTGGATGCACTATTGTGGAAATGTTGATTGGTAATCAACCTTGGTATGGGTGTCCTGTTGGTGAAGTATATCGATCGGTTGTTGAAAAATATGAAAAACCCCAGATTCCTGGTGGCCTTCCATCTTCAGTTGAAAATGTCCTCAGTGGCTGCTTTGAATATGATTTGAGGAATCGCCCTGCAATGGTAGATATTCTGTCCGTCTTTAGAAGCTCACGGAATGCAGTACTCAATGATGGAGGATGGAGATATCTTGGAGTTCCCAAAACTATAGCAAAATCAAGTAGCATGGGCTACACACAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGTGATACAGTGCGCTCTAGAAAGCCTTCCAATTCATGCAATTCACAGAACATGGAGGTCCCAGAAGGAAATATTGTTGGTAATGCAGATCATGGATTTGTTTTAGTGAGGCTCCATGGAGTTCATGACCCTGTAAGAATTCATACGTCAACTCTTGAACGACTCACCAATGGTTTAGGAGCTGGGGATTGGGTGCGCATTAAGGAAGAAGATGATAAACACTCGCCAGTGGGTATTCTTCATTCTATCAATCGTGATGGCAGGGTGACTGTTGGATTTATAGGCCTACGATCTCTTTGGAAAGGAAACTCTTCAGAACTTGAAATGGCAGAGTCTTACTGTGTGGGGCAATTTATTAGGCTGAAACCCAATGTTCTAAGTCCCCGGTTTGAATGGTCGCGTAGAAGGGGTGGTGCCTGGGCAACTGGTAAGATTTCTTGGATCCTGCCAAATGGATGTCTAGTTGTCAAGTTCCCAGGCATGTTGAACATCTGGGATGCACCAAGCACTTTTTTGGCTGATCCCTCTGAGGTTGATGTGGTTAATTTTAAGAATTGTCCAAATATGATAGAGAAGTATCAACACGTAGAGGATCACCACTGGGCAGTTAGACCTGTTCTAATTGCATTTGGCCTTCTTAGTACTGTTAAACTAGGGATGTCAGTTGGAAAGAAAATTGGCAGAAACATGAATGTGAATGCAATGGAGAATGAAAGTCATTATACAGATAGCCAGAATAGTAGCAGCCCTACATCTGCATGGACATCTTCAGTAGCTAACATCCTTTTCAGAGAAGGTGTTAACTTGCCCACTGGGCGGTAG 1869 0.428 MAQDIGTPPVPFDFELLIGDPENLRTVKASSSSTDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYREVAAKMLPPIREEHMKTALEKFYELYFHCQGAARVCWLLGISILNGRICIIMNFYEGSVGDKMARLREGRISLDDVLRYGIDLAQGILELHSKGILVLNLKPSNVLLDDTDQAILGDVGIPNLLFGSSFLSSDTANRLGTPNYMAPEQWQPEVRGPVSFETDSWGFGCTIVEMLIGNQPWYGCPVGEVYRSVVEKYEKPQIPGGLPSSVENVLSGCFEYDLRNRPAMVDILSVFRSSRNAVLNDGGWRYLGVPKTIAKSSSMGYTQWFLSKDHLQVGDTVRSRKPSNSCNSQNMEVPEGNIVGNADHGFVLVRLHGVHDPVRIHTSTLERLTNGLGAGDWVRIKEEDDKHSPVGILHSINRDGRVTVGFIGLRSLWKGNSSELEMAESYCVGQFIRLKPNVLSPRFEWSRRRGGAWATGKISWILPNGCLVVKFPGMLNIWDAPSTFLADPSEVDVVNFKNCPNMIEKYQHVEDHHWAVRPVLIAFGLLSTVKLGMSVGKKIGRNMNVNAMENESHYTDSQNSSSPTSAWTSSVANILFREGVNLPTGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00745 622 Gene3D Transferase(Phosphotransferase) domain 1 129 318 - -
Phco7g00745 622 Pfam Protein tyrosine and serine/threonine kinase 43 305 IPR001245 GO:0004672|GO:0006468
Phco7g00745 622 SUPERFAMILY Protein kinase-like (PK-like) 40 308 IPR011009 -
Phco7g00745 622 PANTHER OS06G0639500 PROTEIN 7 618 - -
Phco7g00745 622 Gene3D Phosphorylase Kinase; domain 1 20 128 - -
Phco7g00745 622 CDD STKc_PknB_like 44 302 - -
Phco7g00745 622 ProSiteProfiles Protein kinase domain profile. 43 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00745 Phco-Chr7 5808188 5811178 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Phco7g00745 PK_Tyr_Ser-Thr 1.2e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00745 7 5808188 5811178 Phco7g00745 7 5808188 5811178 ECH
Phco7g00745 7 5808188 5811178 Phco2g00583 2 5645678 5654524 ECH
Phco2g00583 2 5645678 5654524 Phco7g00745 7 5808188 5811178 PCT