Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00738 ATGGGATTCTTCAGCGGCATGATCCTCGGTATCGCCATTGGTATCGTATTGATCGTCGCTTTCGCTCGTCACGAGAACGTTCGATCCAAACGTCGCACCGATTTGGTATATCCGCATTCATTTGATTTTAACCGCAAAGACGATAGCAGAGTTTGCGAGAATGACAGTGGAAGATTCCAGAAAACTTTTGCCTCCCAAGTTCTATCCATCATGGGTGGTCTTCACACGGAGACAGAATTAAATTGGCTTAATACCCAACTCAAGAGGATTTGGCCACATGTTGATGAGGCAGTGTCAGACTTGATAAGAACCAATGTGGAACCAATTCTTGAACAATATAGGCCGGTTGTTTTGTCCGCTCTCACCTTCTCCAAGTTGACCCTTGGCACTGTGGCTCCACAATTTACAGGAGTTACTATTGTTGAAGAGGATAGTGGGCCTGATGGGGTGACTATGGATATTGAGATGCAATGGGATGGTAACCCGAATATCGTTCTTGACATTAAAACCCGAGTTGGTGTCGTACTTCCTGTACAGGTAAAAAATATTGGATTCACTGGGGTTTTCAGGTTGATCTTCAAACCACTAGTGAATGAGTTCCCCGGTTTCGGAGCTGTTTGTTTTTCCTTGAAAGAAAAGAAAGATCTGGATTTCACTCTGAAAGTTATTGGTGGTGATTTATCAGCTTTACCGGGGATATCTGATGCTATAGAGGAAACAATTAAAGATGCGATTGAAGACTCTGTAAGTTGGCCAGTACGCCAAGTTATACCCATTTTACCGGGGGATTACAGTAATCTAGAGTTGAAACCGGTTGGAATACTGGAAGTAAAACTAGTGCAAGCAAAGAGCTTAACAAATAAAGATTTGATTGGGAAATCCGATCCTTATGCTGTCCTTTTTGTACGCCCGCTTCGTGACAGAACCAAAACCAGTAAAGTAATGAACAACCAGTTGAATCCAGTATGGAATGAACACTTTGAATTCACTATTGAAGATGCGGCAACACAGCACTTGACCATAAGAGTTTTCGATGATGAAGGCATTCAAGCTTCTGAACTTATTGGCTGTGCCCAAACTTCACTGAAGGACCTCGAACCTGGTAAAGTCAAGGATGTGTGGCTTAAGCTGGTTAAGGATTTGGAGATCCATAGAGATAACAAATATAGGGGTGAGGTGCACTTGGAGCTCTTGTACTGCCCATTTGGAGTCGAAAGCGCCATTAAGAACCCTTTTGACCCTGATTTCTCATTAACCTCGTTCGAGAAGACCCTCAAGAGTGGTGAGGCAGAGGGTGAGGATCATACTGTGTCACGTAGGAAAAGCAACGTGATTGTAAGAGGGGTTCTATCTGTGACGGTAATTTCAGCTGAAGACTTACCAGTGGTGGACTTAATGGGCAAGGCTGATCCATTTGTTGTCCTTAGTTTGAAAAAAACAGAAAAAAAACTCAAGACCAGAGTTGTAAATGAATCCCTAAACCCAGTTTGGAATCAAACATTTGATTTTGTTGTGGAGGATGGCTTACACGAAATGTTAATTCTGGAAGTCTACGATCATGATACGTTTGGCAAGGAAAAAATTGGAAGAGTGATCTTAACACTGACTAAGGTCATCTTAGAAGGAGAATACAATGAAACTTATCCTCTGGATGGAGCTAAATCCGGAAACATTTCTTTATATTTGAAGTGGACTCCGCAGCACAAATTCCGGGATACTTAG 1722 0.4239 MGFFSGMILGIAIGIVLIVAFARHENVRSKRRTDLVYPHSFDFNRKDDSRVCENDSGRFQKTFASQVLSIMGGLHTETELNWLNTQLKRIWPHVDEAVSDLIRTNVEPILEQYRPVVLSALTFSKLTLGTVAPQFTGVTIVEEDSGPDGVTMDIEMQWDGNPNIVLDIKTRVGVVLPVQVKNIGFTGVFRLIFKPLVNEFPGFGAVCFSLKEKKDLDFTLKVIGGDLSALPGISDAIEETIKDAIEDSVSWPVRQVIPILPGDYSNLELKPVGILEVKLVQAKSLTNKDLIGKSDPYAVLFVRPLRDRTKTSKVMNNQLNPVWNEHFEFTIEDAATQHLTIRVFDDEGIQASELIGCAQTSLKDLEPGKVKDVWLKLVKDLEIHRDNKYRGEVHLELLYCPFGVESAIKNPFDPDFSLTSFEKTLKSGEAEGEDHTVSRRKSNVIVRGVLSVTVISAEDLPVVDLMGKADPFVVLSLKKTEKKLKTRVVNESLNPVWNQTFDFVVEDGLHEMLILEVYDHDTFGKEKIGRVILTLTKVILEGEYNETYPLDGAKSGNISLYLKWTPQHKFRDT 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00738 573 CDD SMP_SYT 81 259 - -
Phco7g00738 573 FunFam Extended synaptotagmin-2 429 568 - -
Phco7g00738 573 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 76 260 IPR031468 GO:0008289
Phco7g00738 573 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 564 IPR045050 GO:0008289
Phco7g00738 573 SMART C2_3c 274 374 IPR000008 -
Phco7g00738 573 SMART C2_3c 449 547 IPR000008 -
Phco7g00738 573 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 444 567 IPR035892 -
Phco7g00738 573 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 80 259 IPR039010 -
Phco7g00738 573 PRINTS C2 domain signature 465 477 IPR000008 -
Phco7g00738 573 PRINTS C2 domain signature 491 504 IPR000008 -
Phco7g00738 573 PRINTS C2 domain signature 513 521 IPR000008 -
Phco7g00738 573 CDD C2 450 550 - -
Phco7g00738 573 FunFam Plant synaptotagmin 268 410 - -
Phco7g00738 573 Pfam C2 domain 448 550 IPR000008 -
Phco7g00738 573 Pfam C2 domain 273 377 IPR000008 -
Phco7g00738 573 Gene3D C2 domain 445 572 IPR035892 -
Phco7g00738 573 Gene3D C2 domain 269 408 IPR035892 -
Phco7g00738 573 ProSiteProfiles C2 domain profile. 254 375 IPR000008 -
Phco7g00738 573 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 271 402 IPR035892 -
Phco7g00738 573 ProSiteProfiles C2 domain profile. 431 548 IPR000008 -
Phco7g00738 573 CDD C2 275 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00738 Phco-Chr7 5706430 5715667 Dispersed/Wgd