Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00724 ATGCGAACAAGGTTTCTGAACATCATTTCCTCAAACCCTCCGAAGAACCTTAGCCCATTATCCCAGCTCTTCTCAATTTCCACGGACTCTGACCATTTTCCGGAGAAAATCGTTTCAACCTCCAATTTTCCCGAGAAAACCCCCCTGGAAGCCCAATCTCCCGAACCCCCTTTGATTCCGTCGCAAAATGAAGTCCTGGACACTCTCTTGCTCCACAAAGCCGACCCCATATTGGCGTTGATGTTCTTCAAACGAGTAGAGAGACAACGAGGGTTTATAAAAACTGTTGATATTTTATGTTTATTGCTTCAGATTCTCGCTTCGAGCCCCGACACTCAGGGAGATGCCAAGTATTTGCTCAATAACTATGTTTTTGGAGATTCAGCCCCTTGTGCGAAGGTGCTGGTGGAACTCTTGTTGGAGTGTGCGGAAAGGTACGGTTTTGAATTATCCGATTCAAGGGTTTTCAATTATCTGTTGAATAGTTATGTTAGAGCTAATAAGATCACGGACGCTGTTGAGTGCTTTAGAACCATGTTGGAGCACGGCGTTCTTCCTTGGGTTCCAATTGTGAACATTCTTTTGACTGCAATGGTTAGGAGAAACATGGCTTACAATGTGTGCCAAGTGTATGATGAAATGGTTGAGAGAGAACTTTATGGCGATTGCTATACCCTGCATAGTTTAATGCGTGCGTGTTTGAAGGGAGGGAGGTTTGCAGAGGCTTGGAACTACTTCGAAGAGGCGGTGGGTAGAGGGTTGAAGCCTGATGCGGCTGCCTATAGTATTGTTATTCAGGCTGTTTGTAGGGGGCCGGACTTGAATTTGGCATGTAAGCTGTTGAAGGAGATGAAGGAGTTGGGATGGGTGCCATCTGAGGGTACTTATGTTGCTGTGATTGGTGCCTGTGTCAGGCAGGGGAATTTTGTAGAGGCGTTGAGGCTCAAGGATGAAATGGTCAGTAAGGGTGTGCCTATGAATGTAGTTGTTGCGACGAGCTTGGTTAAAGGGCTTTGTATGCGAAGGGATGTGAATAGCGCGTTGCAGATGTTTGATGAGGTTGTTGAGGCTGGTGTTACTCCCAATGTGGCTATTTTTTCGGTTTTGATAGATTGGTGTTCTAAGATTGGGAATGTGGAGAAGGCGAATGAACTTTACACCAGAATGAAACTCATGGGCCTCCAACCCACTGTCTTTATTGTAAATTTTCTGTTGAAAGGATTCCGGAAACAGAACTTGCTAGAAAATGCATATACATTGCTTGATGAGGCAGTTGAAAATGGAATTGCTAGTGTTGTTACATATAACATTGTTTTATTGTGGCTCTGTGAATTGGGCAAGGTTAATGAGGCTTGCAATTTGTGGGACAAGATGATTGGTAAGGGTATTATGCCTTCGCTAGTTTCTTACAACCACATGATCCTTGGTCACTGCAAAACAGGCTGCATGGATGACGCATATAATGTGATGAATGGTATTATTAAAAGTGGCTTAAAACCAAATGTCATCACGTACACGATTTTGATGGAAGGATCTTTTAAGAAGGGTGATTGTGATCATGCTTTTGATCTGTTTGATCAAATGGTGGCGGCAGATATCGTGCCTACAGACTACACATTTAACACAATTATGAATGGCTTGTGTAAAGTTGGCCGAGTGTCTGAGGCAAAGGATAAGTTGAACACTTTTATCAAGCAGGGTTTTATTCCCACATCTATGACTTATAATTGCATCATAGATGGATGTGTCAAGGAAGGTGCAATTGATTCTGCAGAGTCTACCTATAGGGAGATGTGTGACAGTGGAATTTCACCAAATGTCATCACTTATACTAGTTTGATTAATGGATTTTTCAAAAGTAACAAGATTGATCTTGCTTTGAAAATGTATGATGATATGAAAAGCAAGGGTTTGGAATTGGATATTACTGCATATAGTGCTCTCATTGACGGTTTCTGCAAAATGCAAGACATGGAAAATGCAAGGAAAATCTTCTCTGAACTTTTGGAGGTTGGTTTGACTCCAAATACAATTGTTTATAACAGCATGATTAGTGGCTTCAGAAATTTGAATAATATGGAAGCAGCACTTAACCTGCACACGGAAATGATAAATAGTAAGATTCCATGTGATTTACAAATATACACCTCACTGATTGGTGGACTTCTAAAAGAGGGTAAATTAAGTTTTGCTTTAGATCTTTACTCAGAGATGCTTTCCATGGGTATTGTGCCTGATATCTTCATGTACACCATTCTGATAAATGGACTCTGTAACCAGGGACAGCTAGAAAATGCAGGCAAGATTCTAAAGGAAATGGATGGGAATAGTGTAACTCCTACTGTTCTTCTTTATAACACTTTAATTGCTGTACATTTTAAGGAGGGCAATCTACAAGAGGCTTTTAAGCTGCACGACGAGATGCTTGATAAAGGTCTTGTGCCTGATGACACTACATATGATATTCTTGTAAATGGAAAGTTAAAAAGATCATATGTTCCGGTTGTAGCTTAA 2514 0.4117 MRTRFLNIISSNPPKNLSPLSQLFSISTDSDHFPEKIVSTSNFPEKTPLEAQSPEPPLIPSQNEVLDTLLLHKADPILALMFFKRVERQRGFIKTVDILCLLLQILASSPDTQGDAKYLLNNYVFGDSAPCAKVLVELLLECAERYGFELSDSRVFNYLLNSYVRANKITDAVECFRTMLEHGVLPWVPIVNILLTAMVRRNMAYNVCQVYDEMVERELYGDCYTLHSLMRACLKGGRFAEAWNYFEEAVGRGLKPDAAAYSIVIQAVCRGPDLNLACKLLKEMKELGWVPSEGTYVAVIGACVRQGNFVEALRLKDEMVSKGVPMNVVVATSLVKGLCMRRDVNSALQMFDEVVEAGVTPNVAIFSVLIDWCSKIGNVEKANELYTRMKLMGLQPTVFIVNFLLKGFRKQNLLENAYTLLDEAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGIMPSLVSYNHMILGHCKTGCMDDAYNVMNGIIKSGLKPNVITYTILMEGSFKKGDCDHAFDLFDQMVAADIVPTDYTFNTIMNGLCKVGRVSEAKDKLNTFIKQGFIPTSMTYNCIIDGCVKEGAIDSAESTYREMCDSGISPNVITYTSLINGFFKSNKIDLALKMYDDMKSKGLELDITAYSALIDGFCKMQDMENARKIFSELLEVGLTPNTIVYNSMISGFRNLNNMEAALNLHTEMINSKIPCDLQIYTSLIGGLLKEGKLSFALDLYSEMLSMGIVPDIFMYTILINGLCNQGQLENAGKILKEMDGNSVTPTVLLYNTLIAVHFKEGNLQEAFKLHDEMLDKGLVPDDTTYDILVNGKLKRSYVPVVA 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00724 837 Pfam PPR repeat family 503 549 IPR002885 -
Phco7g00724 837 Pfam PPR repeat family 605 654 IPR002885 -
Phco7g00724 837 Pfam PPR repeat family 780 826 IPR002885 -
Phco7g00724 837 Pfam PPR repeat family 431 467 IPR002885 -
Phco7g00724 837 Pfam PPR repeat family 714 759 IPR002885 -
Phco7g00724 837 Pfam PPR repeat family 228 270 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Phco7g00724 837 Pfam PPR repeat 155 184 IPR002885 -
Phco7g00724 837 Pfam PPR repeat 574 603 IPR002885 -
Phco7g00724 837 Pfam PPR repeat 468 498 IPR002885 -
Phco7g00724 837 Pfam PPR repeat 679 707 IPR002885 -
Phco7g00724 837 SUPERFAMILY HCP-like 645 813 - -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 152 186 IPR002885 -
Phco7g00724 837 Gene3D Tetratricopeptide repeat domain 517 621 IPR011990 GO:0005515
Phco7g00724 837 Gene3D Tetratricopeptide repeat domain 57 204 IPR011990 GO:0005515
Phco7g00724 837 SUPERFAMILY TPR-like 156 388 IPR011990 GO:0005515
Phco7g00724 837 SUPERFAMILY HCP-like 409 637 - -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 536 570 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 606 640 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Phco7g00724 837 Pfam Pentatricopeptide repeat domain 314 374 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 676 710 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 746 780 IPR002885 -
Phco7g00724 837 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 431 705 - -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 571 605 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 361 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 781 815 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 641 675 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 711 745 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 678 711 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 433 466 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 224 258 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 538 571 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 574 607 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 155 187 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 644 677 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 365 397 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 332 363 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 714 747 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 749 781 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 260 293 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 468 502 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 785 816 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 608 641 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 295 327 IPR002885 -
Phco7g00724 837 NCBIfam pentatricopeptide repeat 503 536 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 466 500 IPR002885 -
Phco7g00724 837 Gene3D Tetratricopeptide repeat domain 311 429 IPR011990 GO:0005515
Phco7g00724 837 Gene3D Tetratricopeptide repeat domain 430 516 IPR011990 GO:0005515
Phco7g00724 837 Gene3D Tetratricopeptide repeat domain 205 310 IPR011990 GO:0005515
Phco7g00724 837 Gene3D Tetratricopeptide repeat domain 622 727 IPR011990 GO:0005515
Phco7g00724 837 Gene3D Tetratricopeptide repeat domain 728 833 IPR011990 GO:0005515
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Phco7g00724 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -