Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00719 ATGGCTGAGGATAAGGAGATGTCTAACTCTGTCATCAATGGCAATGATTCTCTCACTGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAACCTAAACAGACTATTAGTTACATGGCAGAACGGGTTGTAGGAACTGGGTCATTTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCAGTGGCAATTAAAAAGGTTTTACAAGAGAGGCGATACAAGAATCGTGAACTACAGTTAATGCGTGTGATGGATCACCCAAATGTGATCACTCTGAAGCATTGCTTCTTTTCCACTACAAGTACTGATGAACTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCCATGTATAGAGTTTTGAAACACTATAGCAATGCTAATCAAAGAATGCCCATCATCTATGTGAAACTTTACATGTACCAGATTTTCAGGGGGTTGGCTTATATCCACACTGTTCCCAAAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTGGATCCTCTTACTCACCAAGTGAAGCTATGTGATTTTGGAAGTGCAAAAGTTCTGGTCCAAGGTGAAGCTAGTATATCATACATATGTTCACGATTCTATCGAGCACCAGAACTTATATTTGGTGCCACTGAGTATACAAGTTCAATCGATATTTGGTCCGCTGGCTGTGTCCTTGCCGAACTTCTTTTAGGCCAGCCATTATTTCCTGGCGAAAATGCTGTAGACCAGCTCGTACATATTATAAAGGTGCTTGGCACACCCACTCGAGAGGAAGTACGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCAGAAGCTATTGATCTTGCATCCCGGCTTTTGCAATATTCTCCAAGTCTTAGGTGCACTGCGCTTGAAGCATGTGCTCATCCTTTCTTTGATGAACTCCGAGAACCCAATGCTCGTCTGCCAAATGGTCGTCCATTGCCCCCTCTATTTAACTTCAAACAGGAATTAACCGGAGCATCACCTGAGCTTGTTAATAAGCTGATACCTGACCATGTGAAGCGGCAAATAGGGCTGCAATTTATTCATCTTGGAGGATCGTGA 1143 0.4217 MAEDKEMSNSVINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQERRYKNRELQLMRVMDHPNVITLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKHYSNANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVQGEASISYICSRFYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFPGENAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELTGASPELVNKLIPDHVKRQIGLQFIHLGGS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00719 380 CDD STKc_GSK3 35 327 IPR039192 -
Phco7g00719 380 FunFam Shaggy-related protein kinase kappa 120 367 - -
Phco7g00719 380 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 369 - -
Phco7g00719 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Phco7g00719 380 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Phco7g00719 380 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00719 380 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00719 380 Pfam Protein kinase domain 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00719 380 Gene3D Transferase(Phosphotransferase) domain 1 120 367 - -
Phco7g00719 380 FunFam Glycogen synthase kinase-3 beta 24 119 - -
Phco7g00719 380 SUPERFAMILY Protein kinase-like (PK-like) 39 348 IPR011009 -
Phco7g00719 380 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00719 Phco-Chr7 5554709 5558764 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phco7g00719 Pkinase 3e-65 CL0016