Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00715 ATGAACCTTTTTTTTGTGTTTATTCTTCTTCTGCACTACGTTGCTGCTGCCGACCCTCCTGCTTCCTCTCCTCAACTTCCTCCTGTTTTCTCTCCAGGGAAAGAGCAGCATCACCTGAACAAGAAAATGCTAATAGCTATTGTCGTAGCCATCATTTCACTTGCTGCACTCATTTTCAGTTTCTTATGTTTCTGGATTTGTCACACTAAGTGTCCAACAAAAACCAAAACCAAAAAGGTTCAAACTCCCGGTCCAGATGCAGAGAAGGGGATCACCCTAGCACCGTTTCTGAGTAGATTCAGTTCCATCAAAATTGTTGGTATGAAGGAGTCCGTGCCGATAGTTGATTATAAGCAAATAGAAAAAACGACCAATAATTTTCAGGAAAGTAACATCTTGGGCGAGGGTGGTTTTGGATGTGTTTACAAGGCTCGCTTGGATCATAACCTGGATGTTGCAGTAAAAAAACTACACTGTGAGACTCAACATGCGGAGAGAGAATTCGAGAACGAGGTTAATTTGTTGAGTAAAATTCAGCATCCGAATATAATCTCCTTACTGGGTTGTAGCATTGATGGTGACACGAGGTTTATTGTTTATGAGTTGATGCAAAATGGATCATTGGAGGCTCATTTACATGGACCTACTCATGGCTCGGCATTGACTTGGCACATGAGGATGAAGATTGCCCTTGACACAGCAAAAGGACTAGAATATCTGCATGAACACTGCTACCCTGCAGTGATCCACAGAGACATGAAATCTTCTAATATTCTCTTAGATGCAAACTTCAATGCCAAGCTGTCTGATTTTGGTCTAGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAACTATCGGGTACCTTGGGATACGTAGCACCGGAGTATCTTCTAGATGGTAAATTAAGTGATAAAAGTGATGTGTATGCTTTTGGGGTTGTGCTATTGGAGCTCCTATTAGGAAGGAAGCCAGTGGAAAAACTGGCACCGACGCAATGCCAGTCTATTGTCACATGGGCCATGCCACAGCTCACGGACAGAGCCAAGCTTCCAAACATTGTGGATCCAGTGATTAAGAACACAATGGATCCCAAACACCTGTACCAGGTTGCTGCTGTGGCTGTGCTATGCGTGCAACCAGAACCTAGTTATCGCCCCCTTATCACAGATGTTCTTCACTCACTTATCCCTCTTGTTCCCATGGAGCTTGGAGGAACACTAAGAGTTTCACAAGTGAGGCAGCATAGTACTTCATAG 1263 0.4355 MNLFFVFILLLHYVAAADPPASSPQLPPVFSPGKEQHHLNKKMLIAIVVAIISLAALIFSFLCFWICHTKCPTKTKTKKVQTPGPDAEKGITLAPFLSRFSSIKIVGMKESVPIVDYKQIEKTTNNFQESNILGEGGFGCVYKARLDHNLDVAVKKLHCETQHAEREFENEVNLLSKIQHPNIISLLGCSIDGDTRFIVYELMQNGSLEAHLHGPTHGSALTWHMRMKIALDTAKGLEYLHEHCYPAVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLSDKSDVYAFGVVLLELLLGRKPVEKLAPTQCQSIVTWAMPQLTDRAKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPMELGGTLRVSQVRQHSTS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00715 420 Gene3D Transferase(Phosphotransferase) domain 1 203 403 - -
Phco7g00715 420 SUPERFAMILY Protein kinase-like (PK-like) 105 397 IPR011009 -
Phco7g00715 420 Pfam Protein kinase domain 127 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00715 420 ProSiteProfiles Protein kinase domain profile. 127 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00715 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Phco7g00715 420 Gene3D Phosphorylase Kinase; domain 1 94 202 - -
Phco7g00715 420 FunFam Protein kinase superfamily protein 94 202 - -
Phco7g00715 420 PANTHER OS01G0750732 PROTEIN 33 403 - -
Phco7g00715 420 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Phco7g00715 420 FunFam probable receptor-like protein kinase At1g80640 203 402 - -
Phco7g00715 420 SMART serkin_6 127 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00715 420 CDD STKc_IRAK 133 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00715 Phco-Chr7 5500273 5503311 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Phco7g00715 PK_Tyr_Ser-Thr 2.3e-49 CL0016