Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00710 ATGGAAACACTGAGCTACGAGGCTCCCTTCTATGATAGCCTTTCTGCTGTAGAGACTCCTCCAAGTCCAAGCACACCATTGCAGAATCCACAGGAGAAGAAACAGCTATCTGTTGAGGAAGAAGAAGAAGAAGAAAAAGTGGCAAAAGCAGGTACTTTAGTGGATCTAAATATCCCTGGTGATGATTCGGCTACAGAGTGCAGTCCAGTGCTGAATCTCATCACTTGTCTGAACACGGATTTGTCATCAGAAAACCCCCATGAGCCACGGGTGTTCTCTTGCAACTACTGTCATAGGAAGTTCTACAGTTCACAAGCTCTAGGGGGACACCAAAATGCTCACAAGAGAGAGAGGTCAGTAGCGAAGAGAGGTCACAGATCAGCTTCACCCATGATGGCCCCAGCAACAGCTTTTGGAATTCCCTTTCTCCACAATCACCTTCCTCGCTATGCCACTGTGGCTTCTCTGCAGCTCCATGGTGCTTGTATTAATAAACCACTTGGAATTCAGGCTCACTGTATGATTCACAAGCCTCCTCCTCCTCCTTCTCATCTTTCATTCAATGGGTTTTCGAACACTTTTGGACATCATCATGGGTGGTCAAGGTCAAGACCCCTTATTACTCAACAACCTGGAATAGGGAAGTTAACTACGGAAAGTTGTCACAAGACATCAAGAGGCAGTTTTGGGAGATTAGAAGCCGGAAGCACCATGCTCAATTCAGCAGGTAATGAAGAAATAAGTGAATATCTGGTTAGTGGAAATGTTAGTTTGAAGAGTAGTGAAGAAGAAAAGAAACACCTTGACTTGTCCCTAAAGCTCTAA 825 0.4497 METLSYEAPFYDSLSAVETPPSPSTPLQNPQEKKQLSVEEEEEEEKVAKAGTLVDLNIPGDDSATECSPVLNLITCLNTDLSSENPHEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSVAKRGHRSASPMMAPATAFGIPFLHNHLPRYATVASLQLHGACINKPLGIQAHCMIHKPPPPPSHLSFNGFSNTFGHHHGWSRSRPLITQQPGIGKLTTESCHKTSRGSFGRLEAGSTMLNSAGNEEISEYLVSGNVSLKSSEEEKKHLDLSLKL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00710 274 Gene3D Classic Zinc Finger 76 135 - -
Phco7g00710 274 MobiDBLite consensus disorder prediction 17 33 - -
Phco7g00710 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Phco7g00710 274 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Phco7g00710 274 MobiDBLite consensus disorder prediction 1 48 - -
Phco7g00710 274 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 274 IPR044246 GO:0009788
Phco7g00710 274 MobiDBLite consensus disorder prediction 34 48 - -
Phco7g00710 274 SUPERFAMILY beta-beta-alpha zinc fingers 89 119 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00710 Phco-Chr7 5445169 5445993 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco7g00710 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00541 2 5147759 5148625 Phco7g00710 7 5445169 5445993 PCT