Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00696 ATGACATCTACCGATAAAGAATTGGAAGAACGACTCCTTGAAGCCGGTAACAAGCTCACAGACCCTCCTTCTTCCGTGGAGGAGCTCCTCCCACTTCTAGAACAAGTAGAGAGTCTCCTACTAAGGGTTGAACAGTCACCTGCATCCTCCATGCAAAATGCACTCTCTCCACCATTGAAAGCATTAATTGCAGACAATCTTTTGCGACACTCTGATGATAATGTCAAAGTTGCAGTTGCCTCTTGTATCAGTGAAGTAACAAGAATCACTGCACCTGAAGCTCCTTATGATGATGATCAGATGAAGAAGGTCTTTCAATTAATAGTATCTTCATTTGAAAATCTACATGATAAGCTAAGTCAATCATATGCGAAGAGGATATCAATTCTTGAAACTGTTGCAAAAGTCAGATCATGTGTGGTTATGCTGGACCTTGAATGTGATGCCCTGATTTTAGAAATGTTTCGGCATTTCTTGAAAACAATAAGGGAACATCATCCTGAAAATGTTTTTTCGTCCATGGAAACAATTATGACTCTTGTTCTAGAGGAAAGTGAAGATATATCCCTAGATCTGCTGTCTTCGCTCCTGACCAGCATTAAGAAATACAATGAGGAAGCTTCTCCAATTGCCCAAAAATTGGGGGAGAGGGTCCTTGAAAATTGTGCAACCAAGCTTAAACCCTACTTGGTCAAAGCAGTGAAATCCTTGGGTATATCTTTGGATGGTTATAGTATTGTACTTGCTTCAATATACCAAGATACATCTGCTGACTTGGAGAAAAATGATACATGTGTTACTAGTGAGCATTTGGATGTTAACAAAGATTCAAGGGAAGTTACACCCTTTCAACTAGAAAATCCTGATGTGAATATATCAAAGTCAGTCATGAGCAATGGTGTTGCTTGTGTTGGAGAAGATAATGCTTTTGTTGATTCCAAGTCCAATAAAAAGCAAGAGGATGTTGATTGTTCTGATCATGCAGAAGGTTTGACTACAACTAGTCATGAGGTGCACAAAGATTTGGACACCAGAAAAGTTGACAATAGTAAACAAAAGTCAAAACATTCTACCAAGAGACGACGAAAGAAACTGAGCACTTCAACTAAATCAGCAAAATCTTCCAAGGGTAAAGTTGCTACTAATGTGAAAGAGTCTGAGAAAATGCTGGACTATGAAAGGCACAGCAAGAAAGTTCCCCGTTCCCCTTCTGAGGACCTTTCTGTTGAAGCAGCAGGAGCTTCAGAGAATGACAAAGAAATTGACACTGAGATTTCATTACCAAAGGCATGCAATGATGAATCTGAAGTAGTTGCTTCTCCTCCAAGTGAGAGCTTCCATGAGGAAAAGCTTTCAAAGAAACTTGGACGAACAAAAATGAAAGATGGCTATGTAAAAGAAGGAACTGCAGAGGATCTCTTTAAGGTGTCTGGAGGAGCTAGTGATTCAGAAGCCCAACCTGCCAGGAAGTCAGTGAAAATGTCACATGGTCAGATCTCTGATGTGAAAAACACTAGTGTGGTAGATTCATTAAAAAAAGGAAGTGGTTCAACAATTGATGCAGATACTAAAAAGCACTCTGCCAAGAAATTAGATATTACCAAAAAGGGTACTGGTGGATCCTCTTCAAGGCAGATGGGGGACAAGAAAAAGGGAGGGTGGCGGAAAGCTAACTCTGAAACAGATGTTGCAAAATCATCTGCTATGGATGTGGACAAGGAGTCTGATGCTGAGAAATATGGTGAAAGCCTTGTTGGTTTACGGGTCAAAGTTTGGTGGCCTAAGGATCATGAGTTTTACAAAGGTGTTATTCATTCTTTTGATTCTGCCAAAAAGAAGCACAAGGTCTTCTATGACGATGGAGATGAAGAAACATTAAATCTTGTGAAGGAAAAATGGAAGGTCATTGATGCTGACTCAGATGCAGATGAGGAGGAACAAAGTGAGCGTGCAAGTCTTGATGCTTCCACTGATATGCCACCGGTGAAGAAAAGGAAAACAAGTGTTCGTGAGTCAAACAAGCAAGGAAAGATGGATCCTTGTTCCGGAAGCAATGGAAAAGTAGCATCCAGTAGATCAAAGGGTGTATCCATGAAGTCTAGCGACAAGTCCAAAGATGGTAACAAATTGAAAGATTCCAAGACTATTAGCAAATCAGAGGATGAAGTTAGTAAAAAATCTAAGGACAGCACTGCTAAAAATCGTAGCAGGAAATCTGTTGCTGATAAAAAAATGAGTAGTAAATTCAAAAGCACTGAAACTTCCAAGACAATTGAATCAAAGGATAATGAAACTAACACGTCAAAATCCTCTGTCAAGTCTAAGCATGAAACTTTCACAAATGGAAAATCCAAACTAGAAACCAAGAAGACTACCTTATCAAAAGGAAAACTTCTCAAAAGTGGTGGAAAGATTGATGTTAATGGTACAGGCAAGGTGAAATCTGGTTTGTTGAAGAGAAAAGATCCCAAGAATGATTCAGATGTTTTGGCAGGAGAGGTACAAGATGCTAAGGGAAAGACTTTACATTCATCAAAGCCACAAGGAAGTGAACTCAAGAGTGGAAAGAAACGTCAGAGAAGCTAG 2586 0.3964 MTSTDKELEERLLEAGNKLTDPPSSVEELLPLLEQVESLLLRVEQSPASSMQNALSPPLKALIADNLLRHSDDNVKVAVASCISEVTRITAPEAPYDDDQMKKVFQLIVSSFENLHDKLSQSYAKRISILETVAKVRSCVVMLDLECDALILEMFRHFLKTIREHHPENVFSSMETIMTLVLEESEDISLDLLSSLLTSIKKYNEEASPIAQKLGERVLENCATKLKPYLVKAVKSLGISLDGYSIVLASIYQDTSADLEKNDTCVTSEHLDVNKDSREVTPFQLENPDVNISKSVMSNGVACVGEDNAFVDSKSNKKQEDVDCSDHAEGLTTTSHEVHKDLDTRKVDNSKQKSKHSTKRRRKKLSTSTKSAKSSKGKVATNVKESEKMLDYERHSKKVPRSPSEDLSVEAAGASENDKEIDTEISLPKACNDESEVVASPPSESFHEEKLSKKLGRTKMKDGYVKEGTAEDLFKVSGGASDSEAQPARKSVKMSHGQISDVKNTSVVDSLKKGSGSTIDADTKKHSAKKLDITKKGTGGSSSRQMGDKKKGGWRKANSETDVAKSSAMDVDKESDAEKYGESLVGLRVKVWWPKDHEFYKGVIHSFDSAKKKHKVFYDDGDEETLNLVKEKWKVIDADSDADEEEQSERASLDASTDMPPVKKRKTSVRESNKQGKMDPCSGSNGKVASSRSKGVSMKSSDKSKDGNKLKDSKTISKSEDEVSKKSKDSTAKNRSRKSVADKKMSSKFKSTETSKTIESKDNETNTSKSSVKSKHETFTNGKSKLETKKTTLSKGKLLKSGGKIDVNGTGKVKSGLLKRKDPKNDSDVLAGEVQDAKGKTLHSSKPQGSELKSGKKRQRS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00696 861 CDD Tudor_Agenet_AtEML-like 585 635 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 352 369 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 476 579 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 380 404 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 518 533 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 412 429 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 497 517 - -
Phco7g00696 861 SUPERFAMILY Tudor/PWWP/MBT 583 625 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 659 673 - -
Phco7g00696 861 Pfam Sister chromatid cohesion protein PDS5 protein 28 230 - -
Phco7g00696 861 FunFam Binding protein 580 632 - -
Phco7g00696 861 SUPERFAMILY ARM repeat 66 243 IPR016024 -
Phco7g00696 861 MobiDBLite consensus disorder prediction 674 697 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 328 351 - -
Phco7g00696 861 Gene3D - 575 630 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 328 454 - -
Phco7g00696 861 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 328 777 IPR039776 GO:0007064
Phco7g00696 861 MobiDBLite consensus disorder prediction 815 833 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 636 861 - -
Phco7g00696 861 MobiDBLite consensus disorder prediction 698 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00696 Phco-Chr7 5340494 5348980 Proximal