Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00690 ATGGAAGAGTGTCACACGGTGTTCGGAAAGTACGAGATGGGAAGGCTTCTGGGTAAGGGGACGTTTGCGAAAGTGTATTACGGGAAGCAAATAAGCACGGGCGAGAGCGTGGCGATCAAAGTAATGAGCAAAGAGCAGGTGCGGAAGGAAGGAATGATGGAACAGATCAAACGCGAAATCTCGGTTATGCGTTTGGTGCGACATCCAAACGTGGTGGAGCTCAAGGAAGTTATGGCCACAAAGACAAAAATCTTCTTCGTCATGGAATACGTGCGTGGCGGCGAACTCTTCTCCAAAATCTCCAAAGGCAAACTGAAAGAAGATCTGGCCCGCAAATACTTCCAGCAATTGATCAGCGCCATTGATTATTGCCACAGCAGAGGGGTCTCCCACCGCGATCTCAAACCCGAGAATCTACTCCTGGACGACGACGGGAACCTCAAAATCTCCGACTTCGGTCTATCTGCGCTGCCGGAACAGCTTCGTTACGACGGACTCCTCCACACGCAGTGCGGGACCCCTGCCTACGTGGCACCGGAAGTCTTGAGAAAAAAAGGGTACGACGGGTCAATAGCCGATATCTGGTCGTGCGGCGTCGTTCTGTACGTTCTTCTGGCTGGCTTTCTCCCCTTCCAGCACGAGAATCTGATGACCATGTATAACAAAGTCCTGAGAGCCGAATTCGAATTCCCACCCTGGTTTTCCCCCGAATCCAAGAGGTTGATCTCCAAGATTCTCGTGGCCGACCCTGCCAAGAGAACCACCATTTCCGCCATCACGCGCGTCCCCTGGTTCCGCAAAGGCTTTCCGTTGTTCTCCGTCGCCGACACGTGTCAGGTCGACAAGCAAGAGGCGGTTACGGAGGAAGGTAATAATTCCAAGGTTCCCAAGTTCTTCAACGCCTTCGAGTTTATCTCCTCCATGTCGTCGGGCTTTGATCTCTCGGGGCTGTTCGAGACCAAACGGAAGACGGCCGCGGTGTTCACCTCCAAGTGTTCTGCTGTGGCGATTGTGGCCAAGATCGCCGCCGCGGCCAGGGGGCTGAGTTTTACGGTGTCTGAGGTGAAGGACTTCAAGATCCGGCTCCAGGGGACGGCCGAGGGAAGGAAGGGGCGGCTGGCGGTCACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCCGTGGTGGAGTTTTCCAAGTTCGCCGGCGATACCTTGGAATACGCGAAGTTTTGCGACGAGGACGTTAGGCCCGCGCTGAAGGACATTGTTTGGACGTGGCAAGGGGATGCCACGTGTGCTGCTAACGTCGCCGGCTGTCACGGTGAGGAGTGTCAAAAGCAGGTCGTTAGCACTGTATAA 1341 0.5518 MEECHTVFGKYEMGRLLGKGTFAKVYYGKQISTGESVAIKVMSKEQVRKEGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFSKISKGKLKEDLARKYFQQLISAIDYCHSRGVSHRDLKPENLLLDDDGNLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSIADIWSCGVVLYVLLAGFLPFQHENLMTMYNKVLRAEFEFPPWFSPESKRLISKILVADPAKRTTISAITRVPWFRKGFPLFSVADTCQVDKQEAVTEEGNNSKVPKFFNAFEFISSMSSGFDLSGLFETKRKTAAVFTSKCSAVAIVAKIAAAARGLSFTVSEVKDFKIRLQGTAEGRKGRLAVTAEVFEVAPEVAVVEFSKFAGDTLEYAKFCDEDVRPALKDIVWTWQGDATCAANVAGCHGEECQKQVVSTV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00690 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Phco7g00690 446 Pfam NAF domain 296 352 IPR004041 GO:0007165
Phco7g00690 446 SUPERFAMILY Protein kinase-like (PK-like) 7 279 IPR011009 -
Phco7g00690 446 CDD STKc_SnRK3 10 264 - -
Phco7g00690 446 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00690 446 FunFam Non-specific serine/threonine protein kinase 294 418 - -
Phco7g00690 446 CDD CIPK_C 300 414 - -
Phco7g00690 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 414 - -
Phco7g00690 446 Gene3D Transferase(Phosphotransferase) domain 1 91 269 - -
Phco7g00690 446 ProSiteProfiles NAF domain profile. 294 319 IPR018451 GO:0007165
Phco7g00690 446 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Phco7g00690 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Phco7g00690 446 Gene3D Kinase associated domain 1, KA1 294 419 - -
Phco7g00690 446 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00690 446 FunFam Non-specific serine/threonine protein kinase 4 298 - -
Phco7g00690 446 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00690 446 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00690 Phco-Chr7 5240442 5241782 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco7g00690 Pkinase 1.4e-74 CL0016