Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00665 ATGGCTTCCAAGCTCTGCGACTCATGCAAGTCCGCCACCGCAACCTTGTATTGCCGCCCCGACGCCGCCTTTCTATGCGGAGCCTGCGACTCCAAGGTCCACGCCGCCAACAAGCTCGCCTCGCGCCACCCACGCGTAGCGCTCTGCGAGGTCTGCGAGCAGGCGCCCGCGCACGTCACCTGCAAGGCCGACGCCGCCGTGCTCTGCCTCGCCTGCGACCGCGACATCCACTCTGCCAATCCCCTCGCCAGCCGCCACGAGCGCGTCCCTGTCGTGCCCTTCTACGAGTCCGTACACTCCGTCAAGGCCTCCTCGCCGATCAACTTTCTCGACGACCACCGCTTCTTCTCCGACGCCGACGCTGATGTCAGCACCGAGGAGGCCGAGGCCGCGTCCTGGTTGTTACCTAATCCCAAAACAGATCTAAATTCCTCTCAGTACCTGTTCTCCGAATCCGAACCCGTTCCTTACATAGATCTGGACTATGCCGTCGCGGATCCGAAAGCGGATCCGAAAAACTCCGCTACCGCCGACGGCGTGGTTCCGGTGCAGAGCAACTACGAGCCGTTCGCCTACGGTTACAAATACAATTCCACCACTCTCTCGCAGTCACAGTCTCAGATGAGCCAAAGTGTATCGTCATCGTCGATGGAGGTTGGAGTTGTGCCGGACGGAAACACGATGTCAGAGATATCGAACTGCAGCTACAGCAAGGTGGCCGCGGTGACAGTGACGGCGCAGTTTTCAGCGGCGGATAGGGAGGCAAGAGTGTTAAGGTACCGGGAGAAAAGGAAGAACCGGAAGTTCGAGAAGACAATTCGTTACGCTTCGAGAAAAGCGTATGCAGAAACGAGACCAAGGATCAAAGGCAGGTTCGCTAAACGCTCTGACGCGGACCCTCTGGCTGGATACGGCGTCGTTCCGTCGTGCTGA 933 0.5927 MASKLCDSCKSATATLYCRPDAAFLCGACDSKVHAANKLASRHPRVALCEVCEQAPAHVTCKADAAVLCLACDRDIHSANPLASRHERVPVVPFYESVHSVKASSPINFLDDHRFFSDADADVSTEEAEAASWLLPNPKTDLNSSQYLFSESEPVPYIDLDYAVADPKADPKNSATADGVVPVQSNYEPFAYGYKYNSTTLSQSQSQMSQSVSSSSMEVGVVPDGNTMSEISNCSYSKVAAVTVTAQFSAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSDADPLAGYGVVPSC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00665 310 CDD Bbox1_BBX-like 5 48 - -
Phco7g00665 310 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 298 IPR045281 GO:0009909
Phco7g00665 310 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Phco7g00665 310 Pfam B-box zinc finger 47 91 IPR000315 GO:0008270
Phco7g00665 310 Pfam B-box zinc finger 4 46 IPR000315 GO:0008270
Phco7g00665 310 Pfam CCT motif 253 295 IPR010402 GO:0005515
Phco7g00665 310 CDD Bbox1_BBX-like 48 91 - -
Phco7g00665 310 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Phco7g00665 310 SMART bboxneu5 49 91 IPR000315 GO:0008270
Phco7g00665 310 SMART bboxneu5 1 48 IPR000315 GO:0008270
Phco7g00665 310 ProSiteProfiles CCT domain profile. 253 295 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00665 Phco-Chr7 5084094 5085142 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phco7g00665 zf-B_box 3.7e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00665 7 5084094 5085142 Phco7g00665 7 5084094 5085142 ECH