Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00662 ATGAACAACTCTTTGCTTGCAGCTGCACAAGTTGGAGACATAGACTTGCTCTACAAACTGATTCAGATGCAACCCTATGTGTTGGAGCACACCGGCTTCATGCCATTTGTTGATACTCCACTGCATGTTGCTGCTGCTGCAGGCCATGCCAGTTTTGCCACTGAGGTCATGAGACTCAAACCCTCCTTTGCATGGAAGCTGAACCAGTGTGGCCTTAGCCCCATGCATCTTGCTTTGCAGAACAAGCATCACAGAATGGTGTGTCGCTTTGTGGAGATCAACAAGGACCTTGTTAGGATCAAAGGGAGGGAGGGTCTCACTCCTTTGCATATTGCAACTCAAACTGGGAGAACTGATCTTGTGGTTAAGTTCTTATCAGCTTGTCCAGATTCCATTGAAGATGTAACTGTTAGAAGTGAGACCGCGCTGCATATTGCTGTGAAACATAACCAGTTTCAGGTTTTGGAGGTGTTGGTTGGATGGCTTCAGAGAAACTGCCAAAGACATGCTGAGAACCGGGAGAAAAGGATTCTGAACTGGCAGGATGAGGCAGGCAACACCATTCTTCACCTTTCTGTTCTCAAAGTCCTCCCTCAGGCAGTTAAATTGTTGATAGATAGCAAAATAGACATAAATGCCAAGAACTTTGAGGAATCAACAGCGTTGGACATAGTTGAGATTAACCAAACTGAGGCACACAGTGCAGAAATCAGAGACATGCTAGTGAGAGGTGGAGCTTTACGTGGCTTTTCAGTTGCTACTACAACACTCGTGGAAGAGCTACGAACAAAAATCACATTCAATGAGAGAATAGCAATCTCGGTCACTCGCCTCAGAAAGAGAATATCAAACGACACACGCAATGCTTTGTTAGTGGTGGCCATTCTTTTCGCAACAAACACGTATGAAGCAGTGCGTAGCCCTCCTGGTGGAGTTTACCAAGGAGATGGTAGTGCGATGACATCTAAGAAGATCAGCACATCATTCCAGCACAGTGAGTATGCAGCAACGCAAGAAAATATTGGGAAAGTGGTGATGAAAATGCAAATATTCAATTGGTTCTGGTCCTTCAATACATGCTCCTGTTATCTTTCGATTTTGATGATATGTTTTCTCATGCCACGAGGGCGAATCAGTGTTTTCGTGACCTTACCACTTTCTATATTTTCTGGATGCTACGTGTTCTCCATGTTAGTGATATCACCCAGTTTCAGGTTAAACACTGCCACTGTGGTTCTGCCATGCGTGTTTACGCTATTCTACTGTTGGGGAAGCTCCATATACATTAGATTAGCCAAAAAACTTAAAATGTACGCTCATAAATCGAAAGACACGTTCAAGTTTGTAGGAGGAAACAGATGGTTATGA 1368 0.4408 MNNSLLAAAQVGDIDLLYKLIQMQPYVLEHTGFMPFVDTPLHVAAAAGHASFATEVMRLKPSFAWKLNQCGLSPMHLALQNKHHRMVCRFVEINKDLVRIKGREGLTPLHIATQTGRTDLVVKFLSACPDSIEDVTVRSETALHIAVKHNQFQVLEVLVGWLQRNCQRHAENREKRILNWQDEAGNTILHLSVLKVLPQAVKLLIDSKIDINAKNFEESTALDIVEINQTEAHSAEIRDMLVRGGALRGFSVATTTLVEELRTKITFNERIAISVTRLRKRISNDTRNALLVVAILFATNTYEAVRSPPGGVYQGDGSAMTSKKISTSFQHSEYAATQENIGKVVMKMQIFNWFWSFNTCSCYLSILMICFLMPRGRISVFVTLPLSIFSGCYVFSMLVISPSFRLNTATVVLPCVFTLFYCWGSSIYIRLAKKLKMYAHKSKDTFKFVGGNRWL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00662 455 PANTHER HOMEOBOX PROTEIN WARIAI 11 405 - -
Phco7g00662 455 SUPERFAMILY Ankyrin repeat 5 229 IPR036770 -
Phco7g00662 455 Pfam Ankyrin repeats (many copies) 173 224 IPR002110 GO:0005515
Phco7g00662 455 Gene3D - 1 256 IPR036770 -
Phco7g00662 455 Pfam Domain of unknown function 284 404 IPR026961 -
Phco7g00662 455 ProSiteProfiles Ankyrin repeat region circular profile. 104 125 - -
Phco7g00662 455 PRINTS Ankyrin repeat signature 105 120 IPR002110 GO:0005515
Phco7g00662 455 PRINTS Ankyrin repeat signature 200 214 IPR002110 GO:0005515
Phco7g00662 455 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Phco7g00662 455 SMART ANK_2a 104 134 IPR002110 GO:0005515
Phco7g00662 455 SMART ANK_2a 184 213 IPR002110 GO:0005515
Phco7g00662 455 SMART ANK_2a 36 65 IPR002110 GO:0005515
Phco7g00662 455 SMART ANK_2a 138 168 IPR002110 GO:0005515
Phco7g00662 455 SMART ANK_2a 70 99 IPR002110 GO:0005515
Phco7g00662 455 Pfam Ankyrin repeats (3 copies) 99 159 IPR002110 GO:0005515
Phco7g00662 455 ProSiteProfiles Ankyrin repeat profile. 104 125 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00662 Phco-Chr7 5060238 5061984 Dispersed