Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00640 ATGAGTTCTAAAAAGATTACATGGAAATCTATTGTGTTGATCTTAAACTGTTACAAGACTCAATGTTCCTTACAGGAATCAGAGAAACAGGTTTTAAAACAAGGTTCTTTCCAAAGATTATGCCTCTCGGATATAAGCATTCCTGGCTCCCCTCAGGCCATTGAAGATCTTTCAATTTCACTGGTTGGCCCAAAGCTTTACACATTCACCCTAGAGGAGCTAAGGGAAGCAACGCATAATTTCTCATGGAGTAATCTTCTTGGTGAAGGAGGGTTCGGACCTGTGTACAAAGGTTTTGTTGATGACAAACTTAGACCTGGTTTGAAGGCTCAGTCTGTAGCTGTGAAACAACTGAACTTGGATGGCTTCCAAGGTCACAGGGAGTGGTTGGCGGAGATTATATTTCTTGGACAGCTGAGGCATCCACATCTTGTTAAGTTAATTGGCTACTGTTGTGAGGAGGAGCACAGGCTTCTTGTGTATGAATACATGGCTAGAGGCAGCTTGGAGAATCAACTGTTCAGAAGATACTCTGCTGCTTTGCCATGGTCAACCAGGATGAAGATTGCATTGGGTGCAGCTAAGGGTCTGGCCTTCCTTCATGAAGCAGATAAACCTGTAATATACAGAGATTTCAAAACTTCAAATATCTTACTAGACTCGGATTACACGGCTAAATTATCCGATCTTGGGCTAGCAAAAGATGGTCCTGAAGGGGAAGACACACATCTAACGACAACATGCATAATGGGAACCCGAGGCTATGCTGCTCCTGAGTACATCATGTCAGGTCACCTTTCCACCAAGAGTGATGTCTATAGCTATGGAGTGGTTTTGTTGGAATTGCTTACAGGAAGAAGAGTAGTGGATAAGTGCCGACCCAACAGAGAACGAAGCCTTGTGGAATGGGCAAGGCCTCTTTTGAGGGACCAAAGAAAGCTGCACCATATAATAGACCCTAGATTGGAAGGGCAGTTTCCTACGAAAGGGGCTTTGAAGGTTGCTGCATTGACCTATAAATGTTTGAGCCACCACCCCTATCCAAGGCCAACTATGGGTGATGCGGTTAAGATATTAGAGTCTGTTCAGGATTTTGACGATGTGATCATAGGACCATTTGTGTATGTAGCGGTGAGTGAAAGTAGCCAATGA 1152 0.4392 MSSKKITWKSIVLILNCYKTQCSLQESEKQVLKQGSFQRLCLSDISIPGSPQAIEDLSISLVGPKLYTFTLEELREATHNFSWSNLLGEGGFGPVYKGFVDDKLRPGLKAQSVAVKQLNLDGFQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMARGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDLGLAKDGPEGEDTHLTTTCIMGTRGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGRRVVDKCRPNRERSLVEWARPLLRDQRKLHHIIDPRLEGQFPTKGALKVAALTYKCLSHHPYPRPTMGDAVKILESVQDFDDVIIGPFVYVAVSESSQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00640 383 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 164 368 - -
Phco7g00640 383 ProSiteProfiles Protein kinase domain profile. 81 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00640 383 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672|GO:0006468
Phco7g00640 383 Gene3D Transferase(Phosphotransferase) domain 1 164 369 - -
Phco7g00640 383 Gene3D Phosphorylase Kinase; domain 1 50 163 - -
Phco7g00640 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Phco7g00640 383 SUPERFAMILY Protein kinase-like (PK-like) 57 361 IPR011009 -
Phco7g00640 383 FunFam Serine/threonine-protein kinase BIK1 49 163 - -
Phco7g00640 383 PANTHER OS01G0588500 PROTEIN-RELATED 40 363 - -
Phco7g00640 383 CDD STKc_IRAK 87 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00640 Phco-Chr7 4866356 4868276 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco7g00640 PK_Tyr_Ser-Thr 1e-44 CL0016