Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00622 ATGGAGAAGATGAATTTAAGTGAGACCCAAAGTACTCACCACAACTTTTCTCGCCAATCATCAAAGTCAAAGAATGGATGCTGTCGAGGTTTCAGCAGCGTTAGGACTGTGTCCTCCACCGCACCAACCTCGCAACACCATCAGCTTCAGCAGCTTTACCAAAAATTGGAACTAAAGGTCTCAGGTTTGGAAAAAGAGGTGCAAAGGCAGACAGAACTGCGCGTTATGTATAAGAAAAGAATGGAAAAAACGCAGGATTACTTAAAACACTGTCTCCAAATAGCACAAGAAAATGGAATCTTGGACCTCATTATCGGCTCCAAAGGTGAAGTTTCACAATCTCCCCTCTCTCCACATGCACATGCACATGCACATGCACTCAACTCCACCCCCACTCCTTCCCACCACCACCCCAATCTAATGCCCATCCTTCATCAAGCCAAAATCAACGGATGGTTCATCAACCCTAATGAGATTCAGCTGGGAGAAAAAATAGGGCAGGGAACCACGGCGGAGATTCATAGAGGGACGTGGCGCGGATTTGATGTGGCGGTGAAGTGCATGTCTGCTGCGTTCTTCGGCAAAAACGAAAACGGTGTCGTATTCTTCGCTCAGGAGGTTGAAACCCTCTCGAAGCAGCGTCACCGGTTTGTGCTTCACCTCATGGGTGCGTGTCTCGACCCTCCGCATCATGCATGGTTGGTTACCGAGTATCTGAACACCACGCTCAAGGAGTGGCTACATGGGCCGGGCAAAAGGCCCAAACAAAGAACCGCGCCACTTCCTCCCTTCAAAGACAGGGTGATGCGGGCCCAGGAAATAGCCCAAGCCCTGCACTATCTCCACGAACAAAAGCCCAAAGTCATTCATCGTGACTTGAAGCCCAGCAACATCTTCTTGGACGATGCGCTGCATGTTAGAGTGGCGGATTTTGGTCACGCACGGTTCTTGGGTGATGATGAAATGGCCCTCACTGGAGAAACAGGAACATACGTGTATATGGCACCGGAGGTAATTCGGTGCGAGCCTTATGATGAAAAATGTGATGTATACAGTTTTGGGATCATACTCAACGAGTTACTTACTGGAAAGTACCCTTATATTGAGACAAAACTTGGTCCCGCAAAGATTGCTATGGAAGTTGTGGAGGATGAGCTAAGGCCTGTACTTGCATCAAGGGACGATGGTGAGCAACTGGAAGAACTGATTGACCTAATATGCCTTTGCTGGAATGCAAACCCATCCACTCGACCACCCTTCGCAACAATTAGTCATACCCTCAAATCTTATGTCGAAAGGGTCCTTCAAATTTCAAATTAA 1320 0.4795 MEKMNLSETQSTHHNFSRQSSKSKNGCCRGFSSVRTVSSTAPTSQHHQLQQLYQKLELKVSGLEKEVQRQTELRVMYKKRMEKTQDYLKHCLQIAQENGILDLIIGSKGEVSQSPLSPHAHAHAHALNSTPTPSHHHPNLMPILHQAKINGWFINPNEIQLGEKIGQGTTAEIHRGTWRGFDVAVKCMSAAFFGKNENGVVFFAQEVETLSKQRHRFVLHLMGACLDPPHHAWLVTEYLNTTLKEWLHGPGKRPKQRTAPLPPFKDRVMRAQEIAQALHYLHEQKPKVIHRDLKPSNIFLDDALHVRVADFGHARFLGDDEMALTGETGTYVYMAPEVIRCEPYDEKCDVYSFGIILNELLTGKYPYIETKLGPAKIAMEVVEDELRPVLASRDDGEQLEELIDLICLCWNANPSTRPPFATISHTLKSYVERVLQISN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00622 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Phco7g00622 439 MobiDBLite consensus disorder prediction 112 137 - -
Phco7g00622 439 Coils Coil 46 73 - -
Phco7g00622 439 Gene3D Transferase(Phosphotransferase) domain 1 240 437 - -
Phco7g00622 439 Pfam Protein kinase domain 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00622 439 Gene3D Phosphorylase Kinase; domain 1 147 239 - -
Phco7g00622 439 SMART serkin_6 159 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00622 439 SUPERFAMILY Protein kinase-like (PK-like) 131 425 IPR011009 -
Phco7g00622 439 ProSiteProfiles Protein kinase domain profile. 159 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00622 439 MobiDBLite consensus disorder prediction 1 27 - -
Phco7g00622 439 ProSitePatterns Protein kinases ATP-binding region signature. 165 186 IPR017441 GO:0005524
Phco7g00622 439 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 40 428 - -
Phco7g00622 439 CDD STKc_MAP3K-like 165 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00622 Phco-Chr7 4711323 4713442 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Phco7g00622 Pkinase 7.6e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00622 7 4711323 4713442 Phco7g00622 7 4711323 4713442 ECH