Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00617 ATGGATAACAATTGGAATAACTCCTCCGACTCATTTGACAACAGTCCACTTATTGGTAACTATATTGAACCAGACCCCGCACTTGTCTATATATTCAATGACCAACCCAATGCAATGCCCCAACAACGAAATGCACAACAAAATGATCCTTTTGTGGTTGAACAGGATCATGTTTCCTTCACTGATTTAACCATTCAAGATGTATCCACTCATAGCGATAATGGTCTCACCATAGGAGGAGTTTCTAAATTGGATCAGGGGGATTGGTTGATGAGGAAACGTAAATTTCCCTTCATGGATTCAATGATTGAAGATCATCCCATGCACGACAAAGATAATTTTTCTAATGGAAAAAATATGAGTGCACACATAAATCTAAACGAACTTCGATTTTGGCCTCCCGAAACATTTGATATTGATATTGACACTTCCTTTGACCCATTTCTTCATAACTTGATCGACCGGAACATCTCAATTTTCGATCTATCCAATGATGAACTCATTTCACCCTCCTCACAACAAAATGCATTGCCCCAACACGAACACGAAGTGCTACAAAATGCAGTTTCCAAACAACAAAATGCACTGCCCCAACTCCTGCATACATTGTCCCAAAGCCAAAATGTTTATCAATTTGGCGTTGAACAGATTCATGTTCCCATCCTGAAATCAACGTTCCAAGATCAATCCTTGCATGTGAATTATAATTTTACCACCGGAGGAGAAGTTCCTAACATTGACGTGGAGTATCCATCGAGGAAGGGTAAACAATCCATGGCTGAACATCCATTGTTAAGGCATGGTATACTGAACGAGGAAGACGTGATCGCAATTGATCATTGGGCCCCATCATCAAAGTTACTATCTTGCTCTTGCTGTCAAATTCTTAGACAAATAATTCACACAGATGGTTTTAAGTTTGAAAAGCTAGAGATTCATGGGTCGCTAGGGGTGATTGGCCACGCAATATTCCACATTCAGGATATGACACCGGGGGGTGAACCTCCAAGAGAAATTTATCAAATGATAGATTTGTGCCGCAAAAGCATAGAACAAATAAGGAGTTTCCTGGTAGCGTACTGCAAGGATCAGACAAGATTAGGGCTCGTTACTCTTGATGATCCGTTGTCTGCGTATTATGATACCATCTGCACTGGACTTGATTGGGCTGAACATTATAATGACGGAGACGATGACTTGAATCCACCTAATGGCACAGAGCCTGAATCTGACTCTGAGCCCGAGCCCGAGACTGTTCCTGAGCCTGAGCCTGACCCTGTTCCTGAGCCTCATAATGGAGAGGCTTCAACTACTAAGCCTAAGCCTAAACGTAATATGGCAGTTCAGAGGAAGAGAGTACCAAAGATGACAATGAATGATTTGAGCCCTTTCTTCCATTTAACTATTAGGGATGCAGCGGATAAACTGGATGTAAGCGACTCTGTGGTGAAGAAAATCAGCCGCTTGGGAAACTTAAAAAGGTGGCCCCAAAGAAAGCTGCAAAGCCTTGCGAAGGATGTGAGAGTTCTCAGAAAAGCATTGAATTCACCCTATGAAGAGACAAGGAAGAGAGTTCAACAAGAAATTCAAAGACTGCAGCGAGAAATGGTTGCGATTTGTGGTGGAGTTGTCCCAACCGGAATAGAAATGGTCCAATTGGAAGAAGAATAG 1671 0.4201 MDNNWNNSSDSFDNSPLIGNYIEPDPALVYIFNDQPNAMPQQRNAQQNDPFVVEQDHVSFTDLTIQDVSTHSDNGLTIGGVSKLDQGDWLMRKRKFPFMDSMIEDHPMHDKDNFSNGKNMSAHINLNELRFWPPETFDIDIDTSFDPFLHNLIDRNISIFDLSNDELISPSSQQNALPQHEHEVLQNAVSKQQNALPQLLHTLSQSQNVYQFGVEQIHVPILKSTFQDQSLHVNYNFTTGGEVPNIDVEYPSRKGKQSMAEHPLLRHGILNEEDVIAIDHWAPSSKLLSCSCCQILRQIIHTDGFKFEKLEIHGSLGVIGHAIFHIQDMTPGGEPPREIYQMIDLCRKSIEQIRSFLVAYCKDQTRLGLVTLDDPLSAYYDTICTGLDWAEHYNDGDDDLNPPNGTEPESDSEPEPETVPEPEPDPVPEPHNGEASTTKPKPKRNMAVQRKRVPKMTMNDLSPFFHLTIRDAADKLDVSDSVVKKISRLGNLKRWPQRKLQSLAKDVRVLRKALNSPYEETRKRVQQEIQRLQREMVAICGGVVPTGIEMVQLEEE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00617 556 PANTHER PROTEIN RKD4 280 540 IPR044607 GO:0003700
Phco7g00617 556 ProSiteProfiles RWP-RK domain profile. 443 523 IPR003035 -
Phco7g00617 556 Pfam RWP-RK domain 455 503 IPR003035 -
Phco7g00617 556 Coils Coil 515 535 - -
Phco7g00617 556 MobiDBLite consensus disorder prediction 394 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00617 Phco-Chr7 4675669 4677884 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phco7g00617 RWP-RK 3.3e-15 No_clan