Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00609 ATGGTGCCAAAAATGAGTGATAATAATCCAAAACCACCGGATTCACCTGAGAGTGATTTCAGCAAGCAATGGCATTCGGAGCTCTATGACTACCTGAATTTAGATGACGATCAATTGCCATGTGATGACCTCGATTCATTTGTTTCAGGGCATGTTCCCAGCCATAACACTCAAGCCAATGAAGTCGGTGACCTTGTAGGAAGTAGCACCCACCAAGAAGAGTTTTCTATCAGTAAACAAAGAGACGTAGATGAAAAGAAAGAAGTGAGAGATAGGGTTGCGTTCAAAACAAAGTCAGAGATAGAAATAATGAATGACGGGTTCAAGTGGAGGAAGTACGGAAAGAAGAAGGTGAAAAACAGCCCCAATCCAAGGAACTACTTCAAGTGTTCAGTAGACGGATGTTCAGTAAAAAAGACAGTTGAAAGGGAGAAGGATGATCCGAGGTATGTAATAACAACCTACGTAGGCACCCATACTCATCCGAGTAACAGTTAA 498 0.4197 MVPKMSDNNPKPPDSPESDFSKQWHSELYDYLNLDDDQLPCDDLDSFVSGHVPSHNTQANEVGDLVGSSTHQEEFSISKQRDVDEKKEVRDRVAFKTKSEIEIMNDGFKWRKYGKKKVKNSPNPRNYFKCSVDGCSVKKTVEREKDDPRYVITTYVGTHTHPSNS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00609 165 MobiDBLite consensus disorder prediction 55 81 - -
Phco7g00609 165 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g00609 165 MobiDBLite consensus disorder prediction 1 22 - -
Phco7g00609 165 MobiDBLite consensus disorder prediction 55 74 - -
Phco7g00609 165 SUPERFAMILY WRKY DNA-binding domain 97 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g00609 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 163 IPR044810 GO:0003700
Phco7g00609 165 FunFam WRKY transcription factor 57 90 164 - -
Phco7g00609 165 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco7g00609 165 Gene3D WRKY domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco7g00609 165 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00609 Phco-Chr7 4597733 4598472 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco7g00609 WRKY 4.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00609 7 4597733 4598472 Phco7g00609 7 4597733 4598472 ECH