Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00596 ATGCCTCCTCAACACCCAGGTGCCGCCCCACCGCAGAACGTCACAATGGTGGCAGTTGACAAAGACAAGAACAGTGCCCACGCTTTCCGTTGGGCCGTTAATCATCTTGACAACCCCGTCATCATTGCCGTCCATGTCAAGCACAAAAACTTTTCTCATCATGTCACCAATGTTTTTCCACCAGACGAAGAGGATGTAGTCAATATTTTCAATTCCTTACGTGGAATGTGCAATCGTAGAGCTGTCACGATGAAAGAAGCCGTAGTCGATGATGCCGATGTTGTGAGAGGACTTCTAGAGTTTGCAAACAGGAATCTCATACATAGCATCGTGGTCGGTGCATCCGCCAAAAACCCTTTGTCAAGTCTCAAAAAATTTAAAGCCTATCAGTATCAGGATATACCAACAACCATGATCAAATCAGCTCCAGATTACTGCTCTGTGTACATAATTTCGAAATTGAAGCTTGTGTCTGCTCGATCAGCGGCACGGTCATTGTCAAAAAATTTGACCACATCGAAACAAGTTCCTCTGCCGGCAGGTCCACCTAGTGAACGAGAAGGTGGATCATTAAGGGGACAACCACCTAGAAGTAGGAGTCCTTACGAAGGAGCAGCAGAACCAATGCGAATAACACCGGCAAGAGAAAGACCGAAGAGTGCGGGCAGTAGTATGTCAATAGACAACATTGATATACCCACTCGTCCACGACATTGGTCAATGGATGATAGGGAAATTTCAGGGCTTGGGGCAATGGATTTATCAAGACTTGATTCTGGTATATCAGATTCCATCGGGATGTCATCATCGCCTCAATCCTCAAAAGAACTTGAAGCCGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAACTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAACCAGGCGGAACAGATTCGTCAATGGAAACTGGAAGAGGATCGCAAGGTTGAGGTAGTTAGGTTGTCTCAAGAGGCAGCTCTTGCAATTGCAGAAAAAGAGAAGGCTAGAGCCAAAGCTGCACTGGAAGCAGCTGAGGAGGCTAGGAGGAGGGCTGAACAGGAAGCACAGAGAAGAAAGGATGCAGAGATGAAGGCCAGGGCGGAGGCAGAAGAGAAAGAACGAGCATTATCTACGTTGGCTCAAAACGATATCCGGTATAGAAAATACACCATAGAGGAGATTGAAATAGCCACAGGAAAGTTCTCTGACTCAAACAAAATTGGTGAAGGTGGATATGGACCTGTGTATAAAGGCCACCTCGATCACACCCCGGTTGCAATCAAAATTTTAAGGCCTGATGCCTCTCAGGGCATGAAGCAGTTCAACCAAGAGATTGAGGTACTAAGCTGCATTAGACATCCGCATATGGTCCTCCTGCTTGGTGCATGTCCTGATCATGGATGCTTAGTGTATGAATACCTGGATAATGGTAGCTTAGAAGACAGATTGTTCCGGAAAAATAACAGCAGACCAATTTCATGGAAGAAACGGTTCGAAATATCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAAACAAACCAGAACCTATCGTGCACCGAGACCTCAAACCATCCAACATTCTCGTGGACAGAAATTACGTGAGTAAAATTGGTGATGTTGGTCTTGCACGTTTAGTCCCTCCTTCTGTAGCTGATACAGTGACTCAGTATCACATGACTTCGGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAACAAACGGGAATGCTAACACCAAAGTCTGATATATATTCTCTGGGGATAATGCTACTTCAGATAATCACAGCCAAGCCTCCCATGGGCCTTGCTCACCAAGTTAGGAAGGCAGTTGAAAAGGGCAGGCTTGAGGAAGTGCTCGACCCTGTGATCACAGATTGGCCAATGGAAGAGGCTCTATCATATGCCAAATTAGCATTGAAGTGTGTCCAACTCAGCAAGAAGGACAGACCAAATCTTGCAACGGAGTTGTTGCCTGAGCTTAACAGGTTAAGCAATCTTGAATTGCCTCCACAGAATGATCGATTTTCTTACAGTAGTGATGATACGATCTATAGCTGTACTTCACATCCTCCCACACCTCCGCGAAGTCAATACTCTGATTCAGAGACGTCCTACAGGATCTAG 2157 0.4557 MPPQHPGAAPPQNVTMVAVDKDKNSAHAFRWAVNHLDNPVIIAVHVKHKNFSHHVTNVFPPDEEDVVNIFNSLRGMCNRRAVTMKEAVVDDADVVRGLLEFANRNLIHSIVVGASAKNPLSSLKKFKAYQYQDIPTTMIKSAPDYCSVYIISKLKLVSARSAARSLSKNLTTSKQVPLPAGPPSEREGGSLRGQPPRSRSPYEGAAEPMRITPARERPKSAGSSMSIDNIDIPTRPRHWSMDDREISGLGAMDLSRLDSGISDSIGMSSSPQSSKELEAEMKRLRLELKQTMDMYNSACKQAISAKNQAEQIRQWKLEEDRKVEVVRLSQEAALAIAEKEKARAKAALEAAEEARRRAEQEAQRRKDAEMKARAEAEEKERALSTLAQNDIRYRKYTIEEIEIATGKFSDSNKIGEGGYGPVYKGHLDHTPVAIKILRPDASQGMKQFNQEIEVLSCIRHPHMVLLLGACPDHGCLVYEYLDNGSLEDRLFRKNNSRPISWKKRFEISAEIATALLFLHQNKPEPIVHRDLKPSNILVDRNYVSKIGDVGLARLVPPSVADTVTQYHMTSAAGTFCYIDPEYQQTGMLTPKSDIYSLGIMLLQIITAKPPMGLAHQVRKAVEKGRLEEVLDPVITDWPMEEALSYAKLALKCVQLSKKDRPNLATELLPELNRLSNLELPPQNDRFSYSSDDTIYSCTSHPPTPPRSQYSDSETSYRI 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00596 718 Coils Coil 325 389 - -
Phco7g00596 718 MobiDBLite consensus disorder prediction 355 378 - -
Phco7g00596 718 Gene3D HUPs 10 125 IPR014729 -
Phco7g00596 718 Gene3D Transferase(Phosphotransferase) domain 1 481 690 - -
Phco7g00596 718 MobiDBLite consensus disorder prediction 687 718 - -
Phco7g00596 718 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 122 - -
Phco7g00596 718 Coils Coil 274 294 - -
Phco7g00596 718 CDD STK_N 14 153 - -
Phco7g00596 718 PANTHER OS02G0152300 PROTEIN 15 689 - -
Phco7g00596 718 SUPERFAMILY Protein kinase-like (PK-like) 389 664 IPR011009 -
Phco7g00596 718 SMART serkin_6 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00596 718 FunFam Os07g0541700 protein 481 571 - -
Phco7g00596 718 Pfam Universal stress protein family 16 122 IPR006016 -
Phco7g00596 718 Pfam Protein kinase domain 409 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00596 718 ProSiteProfiles Protein kinase domain profile. 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00596 718 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 381 480 - -
Phco7g00596 718 Gene3D Phosphorylase Kinase; domain 1 376 480 - -
Phco7g00596 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Phco7g00596 718 MobiDBLite consensus disorder prediction 168 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00596 Phco-Chr7 4487135 4490788 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco7g00596 Pkinase 1.3e-43 CL0016