Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00590 ATGGAGGATCTCGAGGAGGAAGAGAACGTAGCGGAGGAGGTGTTGGGGTCAAGCTTGACCATGGAGAAGGTGGCGGCGGCGAAGAAGTTCATTGAGAATCATTATAGGGCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTGTTAGAAAGAAAATTAGCATCTTCGGATGTGCCAAATGAGGAGCGGATCAACCTCATCAAAGATTTAGAGAGGAAGGAGACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTAATGATTTTGAACTTTTGACCATCATTGGAAGGGGGGCTTTTGGGGAGGTCAGACTGTGTCGTGAGAAGAAATCTGGAAATATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTTAGGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCTGAAGTTGCCAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGATGCTGAGTACTTGTATTTGATTATGGAGTATCTACCTGGGGGTGACATTATGACTTTGCTGATGAGGGAAGACACCTTAAGTGAAAATGTTGCTAGATTTTATATTGCACAAAGTGTTCTGGCCATAGAATCTATTCACAAGCACAATTACATTCACAGAGATATTAAACCTGATAACCTACTTCTGGATAAAAATGGTCACATGAAGCTCTCTGATTTTGGTCTCTGTAAGCCTCTCGATTGTATTGCCTTGTCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTTGGCAGAGCCAATGGATGTTGACGGATGTTTGCGAGATGCGGACAATCGGAGCAGCTGGAGAAGTCCACGTGAACAGCTTCAACATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACTGTGGGGACACCAGACTACATTGCTCCTGAAGTACTTCTGAAAAAGGGCTATGGGATGGAATGTGACTGGTGGTCACTGGGAGCAATAATGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCCGATGACCCAATAACCACATGCAGAAAGATTGTTCACTGGAGAAATCATTTAAGATTTCCAGAAGATACCCAGTTAACACTTGAGGCCAAGGATCTAGTTTATAGGTTGCTGTGTGATGTTGATCATAGGTTAGGTACTCGAGGGGCCCATGAAATAAAGGCTCATCCTTGGTTCAATGGTGTGGAGTGGGATAAACTGTATGAAATGGAGGCAGCATTTAAACCTCAAGTTAACGGGGAGCTGGATACCCAAAACTTCATGAAGTTTGATGAGGTGGATCCACCAACAGCTGCAAGAAGTGGGTCTGGATCCTCACGAAAGATGCTAACTACCAAAGATCTAAGCTTCGTTGGTTACACTTACAAGAACTTCGATGCTGTAAAAGAAGGGCTTCGTCAATCTTTTGGTGATTCCATGCAAGATTATGCTTCTAAACGAGCAGCTGAAGAAACAAGTTTACAAATGCTTGCGTCTTCTGGAGATCCCATGTTACCATGA 1524 0.4331 MEDLEEEENVAEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVLERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVNDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDIMTLLMREDTLSENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCIALSTLHENQTMDDETLAEPMDVDGCLRDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDTQLTLEAKDLVYRLLCDVDHRLGTRGAHEIKAHPWFNGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDPPTAARSGSGSSRKMLTTKDLSFVGYTYKNFDAVKEGLRQSFGDSMQDYASKRAAEETSLQMLASSGDPMLP 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00590 507 Gene3D Phosphorylase Kinase; domain 1 64 176 - -
Phco7g00590 507 Gene3D Transferase(Phosphotransferase) domain 1 298 420 - -
Phco7g00590 507 Gene3D Transferase(Phosphotransferase) domain 1 177 242 - -
Phco7g00590 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 446 - -
Phco7g00590 507 Pfam Protein kinase domain 94 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00590 507 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00590 507 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco7g00590 507 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Phco7g00590 507 SMART pkinase_C_6 401 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco7g00590 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Phco7g00590 507 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00590 507 SUPERFAMILY Protein kinase-like (PK-like) 76 450 IPR011009 -
Phco7g00590 507 FunFam Non-specific serine/threonine protein kinase 419 429 - -
Phco7g00590 507 CDD MobB_NDR_LATS-like 27 88 - -
Phco7g00590 507 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00590 507 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Phco7g00590 507 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Phco7g00590 507 Pfam Protein kinase C terminal domain 419 463 IPR017892 GO:0004674|GO:0005524|GO:0006468
Phco7g00590 507 CDD STKc_NDR_like 91 464 - -
Phco7g00590 507 FunFam Non-specific serine/threonine protein kinase 299 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00590 Phco-Chr7 4449847 4459868 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Phco7g00590 Pkinase 8.2e-43 CL0016