Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00580 ATGGGAATACCCAGAAAATGTTCATATTGTGGAAACTTAGGTCACAATTCAAGGACTTGTAAAACTCCTCTCGGTTACGGACACCTCAAGCTCTTTGGAGTGCAACTTCTCATTTCTTCTTCTTCATCATCCTCTTCTATTTCTTTTTCTTCACCTTCTTATTCTGCCATCAAACCATGTTTCAGCACCAACTACCTGTTCTCTTCATCTCCTTCCCTGCTTCATCAAAATCAACATTCAGATGCTTACTTACTCCCTGCCAATAGCCTCCTATCAAAAATTCAAGATACAAAAAAAGGTGTGGCATGGACAGAGGAGGAGCACAGGGTGTTTCTTGTAGGGCTTCAGAAGCTGGGGAAGGGAAACTGGAGAGACATATCTAAAAGTTTTGTCAAAACAAGAACACCTGTGCAAGTGGCAAGTCATGCACAAAAGTATTTTCTCCGACAATCTCAGAATACCTTTCACAAAAGACAACACCGTCCCACCCTGTTCCATGTCCCTTCCTCGTCAACTTCATCTTCAACTCATTGCACTCTTGACATGACAGCCCCAGATTTAGAACTTAAACTTGCAACTCCCACGCCATTGGAGCTATAG 600 0.425 MGIPRKCSYCGNLGHNSRTCKTPLGYGHLKLFGVQLLISSSSSSSSISFSSPSYSAIKPCFSTNYLFSSSPSLLHQNQHSDAYLLPANSLLSKIQDTKKGVAWTEEEHRVFLVGLQKLGKGNWRDISKSFVKTRTPVQVASHAQKYFLRQSQNTFHKRQHRPTLFHVPSSSTSSSTHCTLDMTAPDLELKLATPTPLEL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00580 199 MobiDBLite consensus disorder prediction 157 179 - -
Phco7g00580 199 Gene3D - 103 152 - -
Phco7g00580 199 MobiDBLite consensus disorder prediction 164 179 - -
Phco7g00580 199 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Phco7g00580 199 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Phco7g00580 199 PANTHER TRANSCRIPTION FACTOR KUA1 5 175 - -
Phco7g00580 199 SUPERFAMILY Homeodomain-like 97 151 IPR009057 -
Phco7g00580 199 SMART sant 99 149 IPR001005 -
Phco7g00580 199 CDD SANT 102 147 IPR001005 -
Phco7g00580 199 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Phco7g00580 199 FunFam transcription factor MYB1R1 101 152 - -
Phco7g00580 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00580 Phco-Chr7 4351358 4352946 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco7g00580 Myb_DNA-binding 1.2e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00580 7 4351358 4352946 Phco7g00580 7 4351358 4352946 ECH