Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00574 ATGCAAAATATCTCCTTTTTTCTGCCCTGCCCCACCCATGGGTTTGTGCCAATGGCGGACGAAGCCCACTATTCATCTCCCAACGACTCTACGCCCCTCAAACGCAAGTATGAAGACCAATCCTCCGATAGACCCACCGGCTTCTCCGCCGGCCCCGCTACCGGCATCGAGCTTGCCAAGCAGCGTGCTCAAGAAGTCGCCACTCGCCTCCTCAGCGTTGCTCCTCCTCCCCCGCTCGACGCCAAGCGTCCCAAACCCGATAACGGCGCTCCTACCTCCGGCTTCGATTCTTACGATGCGAAGCCTCAGTACTCGGCCGTTCCTCCCGTCTCCTACAGTCACCAAGGAACGAGCAAGAAGATTGATATCCCTAACGGCAGGGTTGGTGTGATTATTGGCAAAGGTGGAGAGACTATTAAGTATCTCCAGTTGCAGTCTGGTGCTAAAATTCAAGTTACTCGCGATATGGACGCCGACCCTAATTCGACTTCTAGGACGGTTGAGCTTATGGGCACCCCCGAGGCAATTGCCTCTGCTGAGAAACTCATAAATGAAGTTCTTGCTGAGGCTGAATCTGGAGGTTCTGGCATTGTTGCTCGGAGACTGACTGGACAAGCTGGGTCGGATGAATTTGTCATGAGAATTCCAAATAATAAGGTTGGCCTTATAATTGGCAAAGGAGGAGAAACCATAAAGAATATGCAAGCTTCTACTGGAGCACGGATTCAGGTGATACCTTTGCATCTTCCTCCAGGTGACACATCAACTGAAAGAACATTAAAAGTTGACGGGACACCTGAGCAAATTGAGTCTGCAAAGGAGTTGGTTAATCAAATCATCAGTGGCGAGAATCGTCTTAGAAATCCTTCAATGTCTGGTGGGTATCCTCAGCAAGGTTACCAATCTCGACCACCCTCTAACTGGGCTCCCCCTGCACCAATGCAGCAACCTGGTTATGGCTATGTGCAACCTGGAGCATATTCTGGTCCATCACCTCAGTATAACATGCCTCAGCAACCATATTCGGGCTATCCTCCCCAACAACCAGGTGGATATTCCACCAATTGGGACCAGTCTTCTGCACCATCTCACCAACAGTCAACTCATGCTGGCGGCTATGATTACTATAGTCAACAGCCACAGCAACCGCAAAATCCTGGAGGTCCTGCACCTCCAGCTGATGGCTCTGCATACAATTATAGTCAACCACCTTCTTCTGGTTATAGCCAACCCGGACAGGGTTATGCTCAGGACAGCTATAATGCATACAATGCACAATCTCAGTCAGGGTATGGACAACCACCAACATATGATCAGCAGCAAGGCTATGGTTCCGTTACTGGCTATGGTAGTGGGAGTAACCCAGCACAAGAGGGCCACACTGGGGGCTATGCATCACAGGGAGATTCAGCCCAAGCTCCATCTACCCAACAGCCACAGCAAGGTTATCCTACCAGCCAACAGCCTAGCTCAAACACTGCCAGCTACCCACCTCAGGGAACTCCTCAGTCAGGTTATGGGGTTCCCCCTACATCCCAAGCTGCTTATGGAAGTCAACCACAGCCAGGTTATGGACCTGGTTATGGAGCCCCTCAATCTCAAAAGCCAAGTGGTAATCCTCCTGTTTATGGACAGTCGCAGTCACCTAGTGCTGTAGGAGGCTATGGTCAGTCAGCATATCCTGCTCAGCCTCCACCTTCCGGTTATTCTCAACCCCAACCAGAATCTGGTGCTCAGAGAGCACCACCTTCGGGATATGGTGCAGGGCAACCAGGGTATGGTTCTCAAACATATGGTGCACCCCAGGGTGGTCAGCCTGCATATGGTCAGGCACCGCCTCCATACAGCAACAGTTCTTATGGTGCTGGTTATACTCAGGCTCCAGCATACACTGGCGATGGTAATTCCAGTGGGAATACTCAGCCTCCCCAAACAACCGCTGCCAAAACTTCGCCCCAGAGTTGA 1965 0.514 MQNISFFLPCPTHGFVPMADEAHYSSPNDSTPLKRKYEDQSSDRPTGFSAGPATGIELAKQRAQEVATRLLSVAPPPPLDAKRPKPDNGAPTSGFDSYDAKPQYSAVPPVSYSHQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTSRTVELMGTPEAIASAEKLINEVLAEAESGGSGIVARRLTGQAGSDEFVMRIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKVDGTPEQIESAKELVNQIISGENRLRNPSMSGGYPQQGYQSRPPSNWAPPAPMQQPGYGYVQPGAYSGPSPQYNMPQQPYSGYPPQQPGGYSTNWDQSSAPSHQQSTHAGGYDYYSQQPQQPQNPGGPAPPADGSAYNYSQPPSSGYSQPGQGYAQDSYNAYNAQSQSGYGQPPTYDQQQGYGSVTGYGSGSNPAQEGHTGGYASQGDSAQAPSTQQPQQGYPTSQQPSSNTASYPPQGTPQSGYGVPPTSQAAYGSQPQPGYGPGYGAPQSQKPSGNPPVYGQSQSPSAVGGYGQSAYPAQPPPSGYSQPQPESGAQRAPPSGYGAGQPGYGSQTYGAPQGGQPAYGQAPPPYSNSSYGAGYTQAPAYTGDGNSSGNTQPPQTTAAKTSPQS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00574 654 SMART kh_6 115 188 IPR004087 GO:0003676
Phco7g00574 654 SMART kh_6 207 281 IPR004087 GO:0003676
Phco7g00574 654 MobiDBLite consensus disorder prediction 611 654 - -
Phco7g00574 654 MobiDBLite consensus disorder prediction 284 654 - -
Phco7g00574 654 MobiDBLite consensus disorder prediction 532 554 - -
Phco7g00574 654 Gene3D K Homology domain, type 1 111 204 IPR036612 GO:0003723
Phco7g00574 654 Gene3D K Homology domain, type 1 205 306 IPR036612 GO:0003723
Phco7g00574 654 ProSiteProfiles Type-1 KH domain profile. 208 276 - -
Phco7g00574 654 FunFam KH domain-containing protein 203 304 - -
Phco7g00574 654 MobiDBLite consensus disorder prediction 398 519 - -
Phco7g00574 654 MobiDBLite consensus disorder prediction 21 118 - -
Phco7g00574 654 MobiDBLite consensus disorder prediction 284 305 - -
Phco7g00574 654 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 103 479 - -
Phco7g00574 654 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 118 194 IPR036612 GO:0003723
Phco7g00574 654 Pfam KH domain 120 185 IPR004088 GO:0003723
Phco7g00574 654 Pfam KH domain 212 277 IPR004088 GO:0003723
Phco7g00574 654 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 211 283 IPR036612 GO:0003723
Phco7g00574 654 MobiDBLite consensus disorder prediction 328 383 - -
Phco7g00574 654 ProSiteProfiles Type-1 KH domain profile. 116 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00574 Phco-Chr7 4304108 4309203 Dispersed/Tandem