Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00492 ATGTGGTTCATCCTTCTCCCTCTTATTATGTCTCTGCAAATTTCATCTTCAGCAGTACAAATCCTGCATCAAGGTTCATCCCTCTTAGTGGAGGACCCCGATGATGTCATGCTCTCACCAAATGCCATCTTCTGTGCCGGTTTCTATGCCGTTGGCCAAAACGCATATTCCTTCGCAGTTTGGTTCTACCAACCCAACTGCCAAACCCGGAATGCAACCGTCGTATGGATGGCGAACCGTGACTACCCCGTAAACGGCAAGGGCTCGAAGATTTCCCTTCTTAACAATGGCAACCTTGCCTTAAAGGACGCTGACGAATCCCACGTTTGGTCCACAAACACCGTTTCACTGTCGTCTGTGCAACTGTTTCTCGACGACACTGGCAACCTCGTTCTGCGTGAAACGAAGGCTGGCGGTGTCGTCATCTGGCAGAGCTTTGATTTCCCTACGGACACGCTTTTGCCTCAACAAGTGTTCACGAGAAACGCCAAACTGATCTCTTCTTCAAGCGAGACCAACAAGTCCTCCGGTTTCTACACCTTCTTCTTCGACAACGACAACATTCTTCGTCTTCTTTACGATGGTCCTGAAGTTTCCGGCCTTTACTGGCCAGATCCATGGTTGGCCACTTGGGACGCTGGACGTTCCACTTTCAACAACAGTAGAGTTGCGGTTATGGACACACTCGGCAATTTTAGTTCTTCAGATGATTTATCTTTTGTAACATCTGATTTTGGCACTGTGATCCAAAGAAGATTAGTGCTTGATCATGATGGAAACATTCGTGTTTATAGTCGCAGACATGGTGGGGAAAAATGGTCTGTTACGTGGCAAGCCAAAGCAAGACCGTGTTCTATTCATGGTATTTGTGGCCCTAACAGTTTGTGCTCTTATCGTCAAAATTCTAGTGTGAAGTGCTCTTGCCTTCCCGGGTATAAGTGGAAGAATGATCACGATTGGTCTTATGGATGTGAACCGAAATTCTCTACGCTTTGCAACAAAGACGAGTCTCGGTTTTTGTATATAAGCAACGTGGAGTTATATGGCTATGAGTCTGGGATTATGACAAATTACACTCTCCGTCAGTGTCAGGATTTATGCCTTCAATTATGCAACTGTAAAGGTATTCAGTACACATATGTCTTTGGCAGTGGCACTTATACTTGTTACCCGAAGTTGCAGTTGCGAAATGCGTATCGGACACCGTATTTCAACGCTGATTTGTACTTGAAACTGCCAGCAAATAGTTCATATTCTTTTGAAGGATCCACAGATGACCACAGTCTTGATTGTTCTTCGAGTTCGAGGACGATGCAGCTTGAGAGAGCTTATTTCATGAGTCATGAAAACAGATATGTTAAGTTCTTGCTTTGGTTTGTAGGAGGAGTGGGGGCTTTTGAAGTTTTGTGCATATTTGTTATTTGGTTTTTTGTGGTGAGAACAAGGGAGCGAAAATACTCTGGTGTGGATAGAGGAGTCTATAATTTGGCAATGACTGGTTTCAGAAAGTTCAGTTATTCTGAACTGAAACAAGCCACCAAAGGGTTTCGTGAGGAGATAGGAAGGGGTGCAGGAGGGGTTGTATTCAAAGGTGTGTTGTTGGATCAAAGAGTTGCGGCTGTGAAGAGACTCAAGGATGCTAATGAAGGAGAAGAAGATTTCCTCGCAGAAGTAAGCAGCATTGGAAGGCTTAACCATATGAACTTGATCGAGATGTGGGGGTATTGCGCTGAGGGGAAACATAGACTATTGGTGTATGAGTACATGGAGCTTGGGTCTCTAGCACAAAATATGGAGTCCGATGAATTGGATTGGAGCAAAAGGTTTGACATAGCGCTAGGTACAGCTAGAGGGTTGGCTTATGTTCACGAGGAATGTTTGGAGTGGATCCTACACTGTGATGTAAAGCCCCAAAACATTCTTCTTGATTCTAACTATCATCCAAAGGTAGCGGACTTTGGTCTGTCCAAGCTGCGAAACAGAAATGATTCTAGTACATACTCCAGTTTTTCACGGATACGAGGAACAAGAGGGTACATGGCTCCTGAGTGGGTTTTAAACCAACGAATCACGTCAAAAGTTGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGGTAACTGGAAAGAGTGCAACAAAGGACGTTGATGACAGAGATAATGGAGTGGAGAAACAGCATATCAGCATGGTGGGGTGGCTTAAAGATAAAAAGAAAAGTGAATGTGGTTGGGTTGGTGAAATCTTGAAAGCCAATGTAAAAGGAGTTTATGAGGAGGATAAGATGGAAGCTTTGGTGAGAGTGGCTCTGCAATGCGTTGAGGAAGAAAAGGACAAGAGACCCACAATGAGTCAAGTATTAGAAACGCTTCAGAAATGTAGCCGCCAATATGATTATCTGCGATCATCACAAATCAGTGTCGTCTCATAA 2430 0.4407 MWFILLPLIMSLQISSSAVQILHQGSSLLVEDPDDVMLSPNAIFCAGFYAVGQNAYSFAVWFYQPNCQTRNATVVWMANRDYPVNGKGSKISLLNNGNLALKDADESHVWSTNTVSLSSVQLFLDDTGNLVLRETKAGGVVIWQSFDFPTDTLLPQQVFTRNAKLISSSSETNKSSGFYTFFFDNDNILRLLYDGPEVSGLYWPDPWLATWDAGRSTFNNSRVAVMDTLGNFSSSDDLSFVTSDFGTVIQRRLVLDHDGNIRVYSRRHGGEKWSVTWQAKARPCSIHGICGPNSLCSYRQNSSVKCSCLPGYKWKNDHDWSYGCEPKFSTLCNKDESRFLYISNVELYGYESGIMTNYTLRQCQDLCLQLCNCKGIQYTYVFGSGTYTCYPKLQLRNAYRTPYFNADLYLKLPANSSYSFEGSTDDHSLDCSSSSRTMQLERAYFMSHENRYVKFLLWFVGGVGAFEVLCIFVIWFFVVRTRERKYSGVDRGVYNLAMTGFRKFSYSELKQATKGFREEIGRGAGGVVFKGVLLDQRVAAVKRLKDANEGEEDFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMELGSLAQNMESDELDWSKRFDIALGTARGLAYVHEECLEWILHCDVKPQNILLDSNYHPKVADFGLSKLRNRNDSSTYSSFSRIRGTRGYMAPEWVLNQRITSKVDVYSYGIVVLEMVTGKSATKDVDDRDNGVEKQHISMVGWLKDKKKSECGWVGEILKANVKGVYEEDKMEALVRVALQCVEEEKDKRPTMSQVLETLQKCSRQYDYLRSSQISVVS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00492 809 PIRSF SRK 1 807 IPR024171 GO:0004674
Phco7g00492 809 ProSiteProfiles Protein kinase domain profile. 514 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00492 809 SMART serkin_6 514 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00492 809 SUPERFAMILY Protein kinase-like (PK-like) 494 791 IPR011009 -
Phco7g00492 809 Pfam S-locus glycoprotein domain 239 315 IPR000858 GO:0048544
Phco7g00492 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 204 IPR036426 -
Phco7g00492 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 798 - -
Phco7g00492 809 Gene3D Transferase(Phosphotransferase) domain 1 589 806 - -
Phco7g00492 809 ProSiteProfiles Bulb-type lectin domain profile. 13 145 IPR001480 -
Phco7g00492 809 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Phco7g00492 809 SMART blect_4 26 149 IPR001480 -
Phco7g00492 809 Pfam Protein kinase domain 518 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00492 809 FunFam S-receptor-like serine/threonine-protein kinase 483 588 - -
Phco7g00492 809 Gene3D - 148 274 IPR036426 -
Phco7g00492 809 PANTHER OS07G0415500 PROTEIN 7 792 - -
Phco7g00492 809 SMART ntp_6 334 412 IPR003609 -
Phco7g00492 809 Pfam D-mannose binding lectin 73 164 IPR001480 -
Phco7g00492 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Phco7g00492 809 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Phco7g00492 809 Gene3D - 17 147 IPR036426 -
Phco7g00492 809 CDD STKc_IRAK 520 792 - -
Phco7g00492 809 FunFam Serine/threonine-protein kinase 150 277 - -
Phco7g00492 809 CDD PAN_AP_plant 332 413 - -
Phco7g00492 809 CDD B_lectin 38 149 IPR001480 -
Phco7g00492 809 FunFam Putative receptor protein kinase ZmPK1 16 148 - -
Phco7g00492 809 Gene3D Phosphorylase Kinase; domain 1 480 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00492 Phco-Chr7 3615500 3617929 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco7g00492 Pkinase 6.5e-52 CL0016