Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00491 ATGCATATCAACCTCTTTCTCCTTCTCTTCTTCATCTCAACTTCATATGCAGCCACAGATACACTTCCAGAAGGTTCCTCACTTTCAGTAGAGAAACAAAGTCACAGCCTTCTTTCATCCAATGGCGTTTTTTCCGCCGGCTTCTTCCAAGTTGGTGAAAACGCCTTCTGCTTCTCCGTTTGCTTCACGCGCTCCAAACAACCCACCGTTTTATGGATGGCCAACCGCGACGAACCCGTCAACGGCAGAGGCTCCTTCCTCTCACTCTGGAAAAACGGCAATCTCGTTTTGACGGATGCTGGAGGAACCGTTATCTGGGCAACCGCCACTCTTTCCTCCTCCAAACTTCATGTAAAGCTAAGAAACGATGGAAACCTCCTTCTCCTCACTTCCAAAGGCACCATCATTTGGCAAAGCTTCGATTCCCCGACCGACACCCTTCTTCCGACGCAACCACTCACGGAGCGAGTCGGCCTCGTTTCTTCGAAAAGTGCAACGAACCATTCCTCGGGATTCTACAAACTTTACTTCGACAGCGACAACATTCTTCGCTTACTCTACAAAGGTCATACGTTTTCCAGCGTGTACTGGCCTCCATCGTGGCAGCTTCCAATTAACATAGGCAGATCCACCTACAATATGACCAAAACCGCTTTGTTAGATTCCTTTGGAGTCTTCAATTCCTCTGATGGGTATCAGTTCCGCTCCACCGATTATCCCAAAAAGGTGTACAGGAGACTGAAGATGGATTCAGATGGTAACCTGCGTTTGTATAGCTTCAACGAGGAGCATAAGACGTGGGAGGTGACGTGGCAAGTTGTTTCCCAACCGTGCTTCATTCATGGAATTTGTGGAGCTAACAGCTTGTGCAATCATGATCCTATTATCGGAAGGACTTGCTATTGCTTGAAAGGGTTTAAGGTTAAGGATCCTAATGACTGGACTCAGGGGTGTGAGCCTGAGTTTTCTTCTTTTGATTTTTCTTGCAACAGTAGCGAGTCTTTGGGTTTTCTCCATCTTCCAACCACGGAATTTTATGGCTATGACTGGAACAGGGAAGTCGTTTCCAGCATAAAGGAATGCCAGAATATATGTCTGGCACTTTGTGATAAATGTTTTGCTGTTCAATTCCAGTTTAACGAGTATGGCACCTATTATTGTTACCCGAAAACGGAGGCACTCTTTGGACGGGATAGTCCTGATTTCGATGGCGAGGTCTATCTAAAGTTGCCGAATGCGATTTTGCGCTCGTCCACGAAGATTCTAAAGCATTCCCCGATGAATTGCTCCGTTGGTTTATCTCAAAAGTTGAACAGGTTTTATCAACAGCCAGAAAAAAGCTCGACGTTGAGTTTCTTGGTTTGGTTCGCTTTCGGGGTCGGGGTGTTGGAGTTTTCCACCATTTTCCTTGTGTGGTTCTTCTTGTTCAGAACAAGCAAGCACCCTGACACGAAGGATCAACAACACCACCTTCTTTCTGCCACAGGGTTTCAGAGGTTCACCTACGCAGAGCTAAAATCGGCAACAAAAGGGTTCAAAGAAGAGGTTGGGCGAGGAGCAGGAGGGGTTGTTTACAAAGGGACGTTATATGATAACCGTGTAGCGGCTATTAAACGCTTAAACGAAGCTACTCAAGAGGAAGCTGAATTTTTGGCTGAAATAAGCACAATTGGCATGCTGAACCACATGAATTTGATTGACATGTGGGGGTACTGCGTTGAAGGGAAGCACAGGCTTTTGGTGTATGAGTATATGGAACATGGATCATTAGCAGACAATCTCTTTGACAACGCACTTAATTGGAAGAAAAGGTTCAACGTGGCAGTGGGCACAGCGAAAGGTTTGGCTTACTTACACGAAGAATGTTTGGAGTGGATTCTTCATTGCGACGTGAAGCCTCAAAACATTCTCCTTGACTCAGATTTCCTACCCAAGGTAGGAGATTTTGGGTTGTCAAAACTTTTAAACAGAGACGGGCGTGGAAATTCTAGTTTTTCACGAATAAGAGGGACTCGGGGGTATATGGCTCCAGAGTGGATTTACAATCGCCGTATCACTTCTAAGGTGGATGTTTATAGCTATGGGATTGTGGTGTTGGAAATGGTGAGAGGAATAAACCCTATGGCAATCCACAGTCTTGAGAACAGCGGGGACATGGAGCAGCATCGGTTGGTGACGTGGATAAGGGAGAAGATAAAGCACTCGCCCACTTGTGCGTTTTGGACGGAGGAGATAATTGATCCCAACTTGGAAGGAAAGTATGATGTTTCAGAAGTAGAAGTGTTGGTTAAAGTGGCTTTGCAGTGCGTGGAAGATGACATGAATGAAAGACCATCCATGCGCCAAGTTGCAGAGATGCTTCAGGCCAAACAAAATAAACTCCTCCCTCGTTAA 2394 0.4591 MHINLFLLLFFISTSYAATDTLPEGSSLSVEKQSHSLLSSNGVFSAGFFQVGENAFCFSVCFTRSKQPTVLWMANRDEPVNGRGSFLSLWKNGNLVLTDAGGTVIWATATLSSSKLHVKLRNDGNLLLLTSKGTIIWQSFDSPTDTLLPTQPLTERVGLVSSKSATNHSSGFYKLYFDSDNILRLLYKGHTFSSVYWPPSWQLPINIGRSTYNMTKTALLDSFGVFNSSDGYQFRSTDYPKKVYRRLKMDSDGNLRLYSFNEEHKTWEVTWQVVSQPCFIHGICGANSLCNHDPIIGRTCYCLKGFKVKDPNDWTQGCEPEFSSFDFSCNSSESLGFLHLPTTEFYGYDWNREVVSSIKECQNICLALCDKCFAVQFQFNEYGTYYCYPKTEALFGRDSPDFDGEVYLKLPNAILRSSTKILKHSPMNCSVGLSQKLNRFYQQPEKSSTLSFLVWFAFGVGVLEFSTIFLVWFFLFRTSKHPDTKDQQHHLLSATGFQRFTYAELKSATKGFKEEVGRGAGGVVYKGTLYDNRVAAIKRLNEATQEEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLADNLFDNALNWKKRFNVAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSDFLPKVGDFGLSKLLNRDGRGNSSFSRIRGTRGYMAPEWIYNRRITSKVDVYSYGIVVLEMVRGINPMAIHSLENSGDMEQHRLVTWIREKIKHSPTCAFWTEEIIDPNLEGKYDVSEVEVLVKVALQCVEDDMNERPSMRQVAEMLQAKQNKLLPR 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00491 797 Gene3D - 13 142 IPR036426 -
Phco7g00491 797 CDD STKc_IRAK 516 788 - -
Phco7g00491 797 Pfam D-mannose binding lectin 69 154 IPR001480 -
Phco7g00491 797 FunFam S-receptor-like serine/threonine-protein kinase 479 584 - -
Phco7g00491 797 ProSiteProfiles Protein kinase domain profile. 510 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00491 797 Pfam Protein kinase domain 513 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00491 797 SUPERFAMILY Protein kinase-like (PK-like) 485 788 IPR011009 -
Phco7g00491 797 Gene3D - 144 279 - -
Phco7g00491 797 SMART serkin_6 510 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00491 797 SMART blect_4 28 143 IPR001480 -
Phco7g00491 797 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Phco7g00491 797 PIRSF SRK 1 797 IPR024171 GO:0004674
Phco7g00491 797 Pfam S-locus glycoprotein domain 232 309 IPR000858 GO:0048544
Phco7g00491 797 FunFam Putative receptor-like protein kinase 585 793 - -
Phco7g00491 797 Gene3D Phosphorylase Kinase; domain 1 476 584 - -
Phco7g00491 797 CDD PAN_AP_plant 328 411 - -
Phco7g00491 797 Gene3D Transferase(Phosphotransferase) domain 1 585 795 - -
Phco7g00491 797 ProSiteProfiles PAN/Apple domain profile. 329 411 IPR003609 -
Phco7g00491 797 CDD B_lectin 36 143 IPR001480 -
Phco7g00491 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 198 IPR036426 -
Phco7g00491 797 PANTHER OS07G0415500 PROTEIN 5 789 - -
Phco7g00491 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Phco7g00491 797 ProSiteProfiles Bulb-type lectin domain profile. 13 141 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00491 Phco-Chr7 3598893 3601286 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco7g00491 Pkinase 2.3e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00491 7 3598893 3601286 Phco7g00491 7 3598893 3601286 ECH