Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00490 ATGCACCTTATGCTGTCTAGAGCAATGCATATCCACCTCTTTCTCCTTCTCTTCTTCATCTCAACTTCATATGCAGCCACAGATACACTTCCAGAAGGTTCCTCACTTTCAGTAGAGAAACAAAGTGACACCCTTCTTTCATCCAATGGCGATTTTTCCGCCGGCTTCTTCCAAGTTGGTGAAAACGCCTTCTGCTTCTCCGTTTGCTTCACGCGCTCCAAACAACCCACCGTTTTATGGATGGCCAACCGTGATGAACCCGTCAACGGCAAAGATTCCTTCCTCTCACTCTGGAAAAACGGCAAACTCGTTTTGACGGACGCTGGAGGAACCGTTATCTGGGAAACCGCCACTCTTTCCTCCTCCAAACTTCATGTAAAGCTAAGAAACGATGGAAACCTCCTTCTCCTCACTTCCAAAGGCACCATCATTTGGCAAAGCTTCGATTCCCCGACCGACACCCTTCTTCCAACGCAACCACTCACGGAGCGAGTCGGCCTCGTTTCTTCAAGAAGTGCAACGAACCATTCCACGGGATTCTACAAACTTTACTACGACAACGACAACGTTCTTCGCTTACTCTACAAAGGTCATACGTTTTCCAGCGTGTACTGGCCTCCATCGTGGCAGCTTCCAATTAACATAGGCAGATCCACCTACAATATAACCAAAACCGCTTTGTTAGATTCCTTTGGAGTCTTCACTTCCTCTGATGGGTATCAGTTCCGCTCCACCGATTATCCCAAAAAGGTGTACAGGAGACTGAAGATGGATTCAGATGGTAACCTGCGTTTGTATAGCTTCAACGAGGAGCATAAGACGTGGGAGGTGACGTGGCAAGTTGTTTCCCAACCGTGCATCGTTCATGGAATTTGTGGAGCTAACAGCTTGTGCAATCATGATCCTATTATCGGAAGGACTTGCTATTGCTTGAAAGGGTTTAAGGTTAAGGATCCTAATGACTGGACTCAGGGGTGTGAGCCTGAGTTTTCTCCTTCTGATATTTCTTGCAGCAGTCGCGAGTCTTTGGGTTTTCTCCATGTTCCAACCACGGAACTCTATGGCTATGACTGGAACGTGACACGCGTTTCGAGCTTAAAGGAATGCCAGAATATATGTCTGTCACTTTGTGATAAATGTGTAGCTGTTCAATTAAAGTTTAACGAGTTCTCTGACTATAATTGCTACCCGAAAACGATGGCATTCAATGGACGGGATAGTCCTGATTTCGATGGAGAGCTCTATCTAAAGTTGCCGAATGCGATTTTGCGCTCGTCCACGAAGATTCTAAAGCATTCCCCGATGAATTGCTCCGTTGGTTTGTCTCAAAAGTTGAACAGGTTTTATCAGCCCCCAGAAAAAAACTCGACGTTGAGTTTCTTGGTTTGGTTCGCTTTCGGGGTCGGGGTGTTTGAGCTTTCCACCAGTTTCCTAGTATGGTTCTTCTTGTTCAGAACAAGCAAGCACCCTGACACGAAGGATCAACAACACCACCTTCTTTCTGCCACGGGGTTTCAGAGGTTCACCTACGCAGAGCTAAAATCGGCAACAAAAGGGTTCAAAGAAGAGGTTGGGCGAGGAGCAGGCGGGGTTGTTTACAAAGGGACATTATATGATAACCGTGTTGCTGCTATTAAACGCTTAAACGAAGCTACTCAAGGGGAAGCTGAATTTTTGGCTGAAATAAGCACAATTGGCATGCTGAACCACATGAATTTGATTGACATGTGGGGGTATTGCGTTGATGGGAAGCACAGGCTTTTGGTGTATGAGTATATGGAACATGGATCATTAGCAGACAATCTCTTGGGCAACGCACTTGATTGGAAGAAAAGGTTCAACGTGGCAGTGGGTACAGCGAAAGGTTTGGCTTACTTACACGAAGAATGTTTGGAGTGGATTCTTCATTGCGACGTGAAGCCTCAAAACATTCTCCTTGACTCAAATTTCCTACCCAAGGTAGCAGATTTTGGGTTGTCAAAACTTTTAAACAGAGACGAGCGTGGAAATTCTAGTTTTTCACGTATAAGAGGGACTCGAGGTTACATGGCTCCAGAGTGGGTTTACAATCTCCGTATCACTTCTAAGGTGGATGTTTATAGCTATGGGATTGTGGTGTTGGAAATGGTGAGTGGAAGAAGCCCTATGGCAATCCACAGTCTTGAGAACAGTGGGGACATTGAACAGCATCGGTTGGTGACGTGGATAAGGGAGAAGATAAAGCACTCACCCACTTGTGCGTTTTGGATGGAGGAGATAATTGATCCTAATTTGGAAGGAAACTACGACGTTTCAGAAGTAGAGGTTTTGGTTAAAGTGGCTTTGCAGTGCGTGGCAGATGATATGAATGAAAGACCATCCATGAGTCAAGTTGCAGAGATGCTTCAGGCCAATCAAAATAAACTCCTCCCTCGTTAG 2418 0.457 MHLMLSRAMHIHLFLLLFFISTSYAATDTLPEGSSLSVEKQSDTLLSSNGDFSAGFFQVGENAFCFSVCFTRSKQPTVLWMANRDEPVNGKDSFLSLWKNGKLVLTDAGGTVIWETATLSSSKLHVKLRNDGNLLLLTSKGTIIWQSFDSPTDTLLPTQPLTERVGLVSSRSATNHSTGFYKLYYDNDNVLRLLYKGHTFSSVYWPPSWQLPINIGRSTYNITKTALLDSFGVFTSSDGYQFRSTDYPKKVYRRLKMDSDGNLRLYSFNEEHKTWEVTWQVVSQPCIVHGICGANSLCNHDPIIGRTCYCLKGFKVKDPNDWTQGCEPEFSPSDISCSSRESLGFLHVPTTELYGYDWNVTRVSSLKECQNICLSLCDKCVAVQLKFNEFSDYNCYPKTMAFNGRDSPDFDGELYLKLPNAILRSSTKILKHSPMNCSVGLSQKLNRFYQPPEKNSTLSFLVWFAFGVGVFELSTSFLVWFFLFRTSKHPDTKDQQHHLLSATGFQRFTYAELKSATKGFKEEVGRGAGGVVYKGTLYDNRVAAIKRLNEATQGEAEFLAEISTIGMLNHMNLIDMWGYCVDGKHRLLVYEYMEHGSLADNLLGNALDWKKRFNVAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSNFLPKVADFGLSKLLNRDERGNSSFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMVSGRSPMAIHSLENSGDIEQHRLVTWIREKIKHSPTCAFWMEEIIDPNLEGNYDVSEVEVLVKVALQCVADDMNERPSMSQVAEMLQANQNKLLPR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00490 805 CDD B_lectin 44 151 IPR001480 -
Phco7g00490 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Phco7g00490 805 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Phco7g00490 805 FunFam Serine/threonine-protein kinase 593 802 - -
Phco7g00490 805 SUPERFAMILY Protein kinase-like (PK-like) 493 795 IPR011009 -
Phco7g00490 805 CDD PAN_AP_plant 334 419 - -
Phco7g00490 805 SMART serkin_6 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00490 805 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Phco7g00490 805 Pfam D-mannose binding lectin 77 162 IPR001480 -
Phco7g00490 805 SMART blect_4 36 151 IPR001480 -
Phco7g00490 805 Pfam S-locus glycoprotein domain 247 317 IPR000858 GO:0048544
Phco7g00490 805 CDD STKc_IRAK 524 796 - -
Phco7g00490 805 Gene3D Transferase(Phosphotransferase) domain 1 593 803 - -
Phco7g00490 805 Pfam Protein kinase domain 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00490 805 Gene3D - 21 150 IPR036426 -
Phco7g00490 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Phco7g00490 805 ProSiteProfiles Bulb-type lectin domain profile. 21 149 IPR001480 -
Phco7g00490 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 206 IPR036426 -
Phco7g00490 805 Gene3D Phosphorylase Kinase; domain 1 484 592 - -
Phco7g00490 805 ProSiteProfiles Protein kinase domain profile. 518 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00490 805 PANTHER OS07G0415500 PROTEIN 11 797 - -
Phco7g00490 805 FunFam S-receptor-like serine/threonine-protein kinase 487 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00490 Phco-Chr7 3590575 3592992 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco7g00490 Pkinase 3e-51 CL0016