Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00481 ATGCCGAACACAAACCACCCATTCCCATTGCTGTTCCTGCTCCTGATCCTGCTCCTGCACGCTTCTTCATACGCACATTCCTCCCAACTCCAACACCGTCATATTCCGCCGTTAGTTTTCACGGACGCCAGCGCCCTCCTCGCCTTCAAACTTAAAGCCGACGTTAACAACCACCTTGACTTCTCCCCCCTCACGCGCGGCCTCCGCTTCTGCGCTTGGCCGGGCGTCCAATGCAACGGTCCCAAAGTAGAGCGTCTCCTTCTCCAGGGCTTAGATCTCGGCGGCGTTTGGGCTCCAAACACACTCACACGTCTCGACCAGCTCCGAGTCCTCAGTTTACAGAACAACTCACTCACCGGAACCATACCGGACCTCACCTCTCTCTTCAATCTCAAAAGCCTCTTCCTCGACAACAACCAATTCACCGGTTCTCTCCCTCCCTCACTCTTCTCTCTCCACCGTCTACGAAATTTGGATTTCTCCCACAACAATCTCTCTGGACCTATCTCCGCTGCGTTCACTAACCTAGACCGTCTTCACTCACTCCGTCTTAGTTTTAACGATTTTAGCGGTTCAATACCTCCGTTTAACCAGTCCTCTCTCAGAATACTGGAAGTCTCCGGCAACAACCTCTCCGGCGCGATTCCGGTGACGCCGACGCTGTTTCGTTTTCCGCCGTCTTCCTTCGCGTTCAACCCTAACCTCTGCGGTGAAATCATCCGCGTGCAATGCAGTCCTGCGAAGCCTTTCTTCGGGTCCGCGCCGCCGCCTACGGCGGCGCTCAGTCAGAGCGCGCAGGTGCATGGCGTCAATGGCATAATCCAACAGCCGTACGTGAAGAAGCGGCGCGACCGGCGGGCTGTGATAATAGGTTTCTCTGCCGGCGTGTTCGTTTTAGTTTGTTCGCTGGCATGCTTCGCGGCGGCGGTGAGGAAGCAGAGGAGCCGATGCAACAAGGACCAGCGGTCCGGGATGATGGCGGGGGATGTCGCGGCGACGGCGGAGGCCGCGGCGGTGATGCGGATGGAGATGGAGAGAGAGTTGGAGGAGAAGGTGAAGAGAGCGGAGGTGGCGAAGAGTGGGAGTTTGGTATTCTGTGCGGGTGAGGCGCATGTGTATACGCTGGACCAGTTGATGAAGGGTTCTGCGGAGCTTTTAGGGAGAGGGTGTTTGGGAACCACTTACAAGGCGGCTCTTGATAACCGTCTGATGGTGACAGTGAAGCGCCTTGATGCGGGAAAAATGGCTGCCCATGCAACGAAGGAAGTGTTCGAACGACACATGGAATCCGTCGGTGCGCTTCGACACCCCAATTTGGTTCCTCTTAGGGCCTATTTCCAGGCCAAGCAAGAGAGGCTCATTATCTATGACTTTCAGCCCAATGGCAGTCTCTTCTCCCTCATACATGGATCGAGATCAAGCAGGGCAAGGCCATTACACTGGACATCATGCTTAAAAATAGCAGAGGACGTAGCACAAGGTTTGGCCTTCATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAAGTCCTCCAATGTCCTTCTTGGACCTGATTTCGAGGCATGCATCACAGATTACTGCCTCTCCGTGTTGACACACCCATCCACATTTGATGAAGATGGGGATTCAGCAGCGTACAGAGCTCCAGAGACTCGCAACCCCAATCATCAGCCAACCCACAAATCCGATGTTTATGCGTATGGGATTTTGTTGCTTGAGCTTCTGACGGGAAAATTTCCCTCGGAGCTTCCATTCATGGTTCCTGGTGAAATGTCAAGTTGGGTGCGGTCCATCAGGGATGACAACGGGGGCGAAGATAGCCGAATGGACATGCTTCTTCAGGTGGCTACTACTTGTAGCTTGACCTCACCGGAGCAGAGGCCAACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGAGATTGTACTATTGGAGGATAGTACTGACTTGGAACTGCAGAGTGGTAATGCAATGCCTTAG 1989 0.54 MPNTNHPFPLLFLLLILLLHASSYAHSSQLQHRHIPPLVFTDASALLAFKLKADVNNHLDFSPLTRGLRFCAWPGVQCNGPKVERLLLQGLDLGGVWAPNTLTRLDQLRVLSLQNNSLTGTIPDLTSLFNLKSLFLDNNQFTGSLPPSLFSLHRLRNLDFSHNNLSGPISAAFTNLDRLHSLRLSFNDFSGSIPPFNQSSLRILEVSGNNLSGAIPVTPTLFRFPPSSFAFNPNLCGEIIRVQCSPAKPFFGSAPPPTAALSQSAQVHGVNGIIQQPYVKKRRDRRAVIIGFSAGVFVLVCSLACFAAAVRKQRSRCNKDQRSGMMAGDVAATAEAAAVMRMEMERELEEKVKRAEVAKSGSLVFCAGEAHVYTLDQLMKGSAELLGRGCLGTTYKAALDNRLMVTVKRLDAGKMAAHATKEVFERHMESVGALRHPNLVPLRAYFQAKQERLIIYDFQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSVLTHPSTFDEDGDSAAYRAPETRNPNHQPTHKSDVYAYGILLLELLTGKFPSELPFMVPGEMSSWVRSIRDDNGGEDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDSTDLELQSGNAMP 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00481 662 ProSiteProfiles Leucine-rich repeat profile. 107 129 IPR001611 GO:0005515
Phco7g00481 662 Gene3D Transferase(Phosphotransferase) domain 1 460 653 - -
Phco7g00481 662 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Phco7g00481 662 SUPERFAMILY Protein kinase-like (PK-like) 384 639 IPR011009 -
Phco7g00481 662 FunFam Nuclear pore complex protein NUP107 39 195 - -
Phco7g00481 662 SUPERFAMILY L domain-like 40 218 - -
Phco7g00481 662 Pfam Protein tyrosine and serine/threonine kinase 384 638 IPR001245 GO:0004672|GO:0006468
Phco7g00481 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 642 IPR046959 -
Phco7g00481 662 Gene3D Ribonuclease Inhibitor 40 198 IPR032675 -
Phco7g00481 662 Gene3D Ribonuclease Inhibitor 199 246 IPR032675 -
Phco7g00481 662 Gene3D Phosphorylase Kinase; domain 1 344 458 - -
Phco7g00481 662 ProSiteProfiles Protein kinase domain profile. 380 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00481 Phco-Chr7 3505934 3509051 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco7g00481 Pkinase 3e-29 CL0016