Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00475 ATGGGGGTGGAGCGAGTGTTGGACATTCTCTGGCAGTGGAAAAGGACAATCCCATTCATCCTTTTATTCATCCTTTTATTCATCCTTTTGGATATAAAAATCCGTATCCTGAAAAGCAGATCGAAGGGCTTCCATTTTCAAGTTTTGGGATTAGAGGAATCTTTTTGCATTCCTCACATCACTTTATTGATGACTAAAAGCTTTGAAAGAGAGAGAGGGAAAGAGAGTGAAAGAGAGGGAAAGAGGCCACCGAAAAGCATGGATACGTTATCATCAAAGCAAGAAAATAACTCCCCATTTGACGGCCCAACACACACTCCCTCCTCCAACCCTTCTCCACACGCGCTCATTCCCTTCCGCTTTATCCATCCATATACTAAACAACATTTATTCACACACATTGTTTTCCCTTTCAAATTGGTGGAAATTGTTAAGTCAACTACATCTCATCATTTGGTCTTGGTTTTTGTAGGCAACACCTCATTTCCCACTTTCTCCACTTTACTAAAGTCTCATCTAATCCTCTTCTATATCATCTTCTATCATCCTCTCTTCTCTTCAATGACCACCAGCATGAAGGTGCATCACTTTACACGTGCATTCTGGGAGCACGAACCTTTCCTCACCCTTGGCTGCAACCGATTACGCCCTCTTGCTCCCAAGCTTCCCAGCCTACACACCACCACCACCCCTTCTCTTCCTTTCGATCTCAAGAGCTTCATCAGACCAGAAAGTGGTCCCAGAAAACTAGTTTCCTTTCTCCACAATAACAAGGATCCACCTTCACCCCAAGGCCAGGTTGAAACGCATCCAGGAGGGACGCGGTGGAATCCGACGCAAGAACAGATAGGTATATTGGAGATGCTGTACAAAGGAGGGACGAGAACTCCAAATGCTCAGCAGATAGAGCAGATCACGGTTCAGCTAGGAAAGTACGGAAAGATCGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGTAGCAGCCTTGCCTTTTCTCATACTCCTCGAACTCCCACAATTCATACTGTTGTTACTTTAGAGACAACAAGGGGGGAAGGAGTGGACAGAGATGAGGAGGAAGGTAGTCCGTGTAAAAAGAAGTGTAGGAGATGGGTATTTGATTGTTTGGAAGAGCAAAGCATGTCATCATCATCACTGTGTGAAGAGGAGGAACATAGAACTCTGGAGCTTTTCCCATTGCAGCCGGAAGGAAGATTAAGGGTTTGA 1260 0.4476 MGVERVLDILWQWKRTIPFILLFILLFILLDIKIRILKSRSKGFHFQVLGLEESFCIPHITLLMTKSFERERGKESEREGKRPPKSMDTLSSKQENNSPFDGPTHTPSSNPSPHALIPFRFIHPYTKQHLFTHIVFPFKLVEIVKSTTSHHLVLVFVGNTSFPTFSTLLKSHLILFYIIFYHPLFSSMTTSMKVHHFTRAFWEHEPFLTLGCNRLRPLAPKLPSLHTTTTPSLPFDLKSFIRPESGPRKLVSFLHNNKDPPSPQGQVETHPGGTRWNPTQEQIGILEMLYKGGTRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRSSLAFSHTPRTPTIHTVVTLETTRGEGVDRDEEEGSPCKKKCRRWVFDCLEEQSMSSSSLCEEEEHRTLELFPLQPEGRLRV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00475 419 MobiDBLite consensus disorder prediction 89 110 - -
Phco7g00475 419 CDD homeodomain 274 335 IPR001356 GO:0003677
Phco7g00475 419 MobiDBLite consensus disorder prediction 256 276 - -
Phco7g00475 419 MobiDBLite consensus disorder prediction 71 110 - -
Phco7g00475 419 MobiDBLite consensus disorder prediction 71 88 - -
Phco7g00475 419 MobiDBLite consensus disorder prediction 257 276 - -
Phco7g00475 419 FunFam WUSCHEL-related homeobox 4 273 340 - -
Phco7g00475 419 SUPERFAMILY Homeodomain-like 270 341 IPR009057 -
Phco7g00475 419 Gene3D - 274 339 - -
Phco7g00475 419 SMART HOX_1 271 338 IPR001356 GO:0003677
Phco7g00475 419 PANTHER WUSCHEL-RELATED HOMEOBOX 4 192 416 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Phco7g00475 419 ProSiteProfiles 'Homeobox' domain profile. 269 334 IPR001356 GO:0003677
Phco7g00475 419 Pfam Homeodomain 274 333 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00475 Phco-Chr7 3440002 3442029 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco7g00475 Homeodomain 2.1e-18 CL0123