Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00460 ATGGACACTGTGGAGCAGTTAAAGCCGGAGGAGAAGCAGCACCAGCAGATGGACATCATGACCATGATGATGCAACACATACCTCAATTCTCTGAACCCTACGGTGACACCAACACCATGGAAGATTTTCACCCCCCCGAGGAGTTCTACGGCAACAACAATATATGCACTGGTAGCACTGTGCCACTAGCAGATTTACTTGATAATAACCCTCCTAGCCCTATACCTTGGTCCTCTTACTCGTTCACGCACTTATTACCATCGTCCACATCTCCCATCACAATCTCTTTCTCCGACAACAACAACAACAACCCTTCCCCAATAATGCCTCAACAAACCCCAACCGAGGGTGCAACTGTAAACCCTTACGGTGAGAAGCGGAACTCCATGGCGGCGATGAGGGATATGATATTCAGGATGGCGGCGATGCAGCCGATACACATAGACCCGGAGTCGGTGAAGCCGCCGAAGCGGAGGAACGTGAAGATTTCGAAGGACCCTCAGAGTGTGGCAGCGCGGCACCGCAGAGAGAGGATCAGCGAGAGGATAAGGATACTGCAGAGACTGGTCCCTGGAGGGACCAAGATGGACACTGCGTCCATGTTGGATGAGGCCATTCACTACGTGAAGTTTCTGAAAACGCAGGTTCAGTCGCTGGAACGCGCTTCCTCTAACAATATTAGGCCACTTGTCGGTGTTAACGCACCAGGGATAGGGTTCCCTGTTGCTATGTCTGGTTCTATTAGGACTGCTACCACTTCCAGTTCAAATTCCACCCCTAATTTTCCTCTGCCTAATAGATATGATTAA 810 0.5037 MDTVEQLKPEEKQHQQMDIMTMMMQHIPQFSEPYGDTNTMEDFHPPEEFYGNNNICTGSTVPLADLLDNNPPSPIPWSSYSFTHLLPSSTSPITISFSDNNNNNPSPIMPQQTPTEGATVNPYGEKRNSMAAMRDMIFRMAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASSNNIRPLVGVNAPGIGFPVAMSGSIRTATTSSSNSTPNFPLPNRYD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00460 269 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 41 256 IPR045843 GO:0003700|GO:0006355
Phco7g00460 269 Pfam Helix-loop-helix DNA-binding domain 172 212 IPR011598 GO:0046983
Phco7g00460 269 MobiDBLite consensus disorder prediction 250 269 - -
Phco7g00460 269 Gene3D - 162 229 IPR036638 GO:0046983
Phco7g00460 269 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 221 IPR036638 GO:0046983
Phco7g00460 269 SMART finulus 169 218 IPR011598 GO:0046983
Phco7g00460 269 FunFam BHLH transcription factor 166 229 - -
Phco7g00460 269 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00460 Phco-Chr7 3294850 3295659 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco7g00460 HLH 1.6e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00460 7 3294850 3295659 Phco7g00460 7 3294850 3295659 ECH