Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00458 ATGAATTTCAAGAGCTTCGGGAATGAAGCTGGCGGCGACGGAGGAGGGAGGCCGCCGGGGAACTTCTCCCTGACGCGGCAGTCGTCGGTGTACTCGCTAACGTTCGACGAGTTCATGAACACCATGGGAGGTTCCGGGAAGGACTTTGGCTCCATGAACATGGACGAGTTGCTGAAGAACATTTGGACGGCGGAGGAGGTTCAGACAATGGCTTCGGCGGGCGTCGCCGCCGCCGACGGAGGCGCCGGCATCAGCCATTTGCAACGGCAGGGGTCGCTGACGCTGCCGCGGACTCTGAGCCAGAAGACAGTGGATGAGGTTTGGAAGGACATTTCGAAAGATTACGGTGGCCACGGCGAGCCCAATCTTGCACAGACGCCGAGACAGCCCACTCTGAGAGAGATGACTTTGGAGGAGTTTCTGGTCAGAGCTGGTGTTGTTAGAGAAGAGGCGAAGCCAAACGATGGCGTTTTCATGGATCTGGCTCGTGCAGGGAATAACAACGGTTTGGGGTTTGAGTTCCAGCAGATGAACAAGGTTGCTGCCGCTACCGGTTTGATGGGTAACCGGTTGAACAATGATCCACTGGTGGGTCTTCAGTCTTCTGCCAACTTGCCTTTGAATGTTAATGGGGTGAGATCATCCAGTCAGCAGCCACAGATGCAGAGTCCACAGTCTCAGCAACAGCATCATCAGCAGCAGATATTTCCTAAGCAGAGCGCTATGTCTTATGCAGTTGCTCAGATGCCCCAGGGAATGGTGAGGGGTGGGATTGTGGGACTCGGTGGTGATCAGGGTTTGAGCGTGCAAGGTGGAGGGATTGGTATGGTTGGTTTGGCACCCGGGTCAGTTCATGTTGCTACTGGGTCTCCTGCTGCTAACCAATTATCTGGTGATAAGATGACCAAGAGCAACGGTGATACCTCGTCCGTGTCACCGGTTCCTTATGTATTTAACGGAGGTATGCGAGGGAGGAAGAGTGGAGGAGCTGTGGAGAAGGTGATTGAGAGGAGGCAGAGAAGGATGATAAAGAACAGAGAGTCAGCTGCCAGGTCACGGGCACGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAGGAGAACCAGGAACTTCAGAAAAAACAGGCTGAAATCATGGAAATTCAGAAAAATCAAGTTAAGGAAATGATGAATTTGCAACGAGAAGTCAAGAGAAGACGCCTCAGACGAACACAAACTGGTCCGTGGTAG 1248 0.5272 MNFKSFGNEAGGDGGGRPPGNFSLTRQSSVYSLTFDEFMNTMGGSGKDFGSMNMDELLKNIWTAEEVQTMASAGVAAADGGAGISHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGEPNLAQTPRQPTLREMTLEEFLVRAGVVREEAKPNDGVFMDLARAGNNNGLGFEFQQMNKVAAATGLMGNRLNNDPLVGLQSSANLPLNVNGVRSSSQQPQMQSPQSQQQHHQQQIFPKQSAMSYAVAQMPQGMVRGGIVGLGGDQGLSVQGGGIGMVGLAPGSVHVATGSPAANQLSGDKMTKSNGDTSSVSPVPYVFNGGMRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKKQAEIMEIQKNQVKEMMNLQREVKRRRLRRTQTGPW 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00458 415 CDD bZIP_plant_BZIP46 337 391 - -
Phco7g00458 415 SUPERFAMILY Leucine zipper domain 337 386 IPR046347 GO:0003700|GO:0006355
Phco7g00458 415 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 415 IPR043452 GO:0003700|GO:0045893
Phco7g00458 415 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 340 355 IPR004827 GO:0003700|GO:0006355
Phco7g00458 415 MobiDBLite consensus disorder prediction 207 239 - -
Phco7g00458 415 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 335 392 - -
Phco7g00458 415 Gene3D - 335 392 - -
Phco7g00458 415 Coils Coil 353 405 - -
Phco7g00458 415 MobiDBLite consensus disorder prediction 293 315 - -
Phco7g00458 415 MobiDBLite consensus disorder prediction 1 23 - -
Phco7g00458 415 Pfam bZIP transcription factor 337 387 IPR004827 GO:0003700|GO:0006355
Phco7g00458 415 MobiDBLite consensus disorder prediction 293 323 - -
Phco7g00458 415 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 335 386 IPR004827 GO:0003700|GO:0006355
Phco7g00458 415 SMART brlzneu 333 398 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00458 Phco-Chr7 3275407 3279102 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco7g00458 bZIP_1 1.2e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00458 7 3275407 3279102 Phco7g00458 7 3275407 3279102 ECH