Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00442 ATGGTGGCAGCATCAGCATACGAGGAGAGTCGTCGCAAGAGATTGGAGGAAAACAGAAAGAGAATGGAAGCTCTCAATCTCCCTCTCCTCTCTCGAGCCCTTCACAAATCCCATTCTCCCGTTTCCTCCCCTTTGAAATCGGTGAAGAAGCGCAACATTCAGGAACAAATGGTTGTCGTGAGAAGATCAGGCCGTCTGGCCAACTTGCCATCTCCTATTTACAAAGAAGTAGTTATTGATCGTGTCTCTATAGCTCGAAGAAATATTGGGAATAGGCACAGAGATTTTGTTAATAGAGTATACGCTTCAGATGAAGCCAGGCAAGAAGCTTTAGAAAAAGCAGAAAACTTAATGTCGGGTCTAGAATCTGATTACCCGAACTTCATAAAGTCTATGCTCCAGTCCCATATCAGTGGAGGCTTCTGGCTGGGCCTTCCAGTCCATTTCTGCAAGAGCAATCTTCCAAAAGGGGATGAAGTGATGACTTTGATTGATGAAGATGGGAATGAGTATCCAACAATATATTTGCCACGTAAAACAGGACTTAGTGGGGGATGGAAAGGTTTTGCGGTTGCTCATGACCTAGCTGATGGGGACGCTTTAATTTTCCAATTAATCAGGCGCACTGCATTCAAGGTGTACATTATTAGAGCGAATAGTGCTTCAGAGGATAAACAACTCAAGCTTTTGGACATCAACAATGGTGATTTGATAAAACTTGATGAGAAATTGAGCAACAAGATCTCTAATGTAGTGGAAGGAACGTCTTCGGGTTTAGTTTTTGTGTGGAAGACTAACTTGTGTGTTACATGTATCCTCTTTGAGGAGCAAAGAAAGAGAGAAAGAAAAAGGAAACGGCTCATTCATTCATCTCTCTCTCTCTCTCTGTGTTTCGTTTTGCTTTGTTTTGTTTTATGCTTTATTGTCTCTATGCGTTGTTGTTTGCATAATCCAACCATACAAACAATAATGCAAGCTCTGCAGAACGCCGGGATCCGCGTATTTCGACGCCTCCATTCCACCCTGTCTTAA 1032 0.4264 MVAASAYEESRRKRLEENRKRMEALNLPLLSRALHKSHSPVSSPLKSVKKRNIQEQMVVVRRSGRLANLPSPIYKEVVIDRVSIARRNIGNRHRDFVNRVYASDEARQEALEKAENLMSGLESDYPNFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEYPTIYLPRKTGLSGGWKGFAVAHDLADGDALIFQLIRRTAFKVYIIRANSASEDKQLKLLDINNGDLIKLDEKLSNKISNVVEGTSSGLVFVWKTNLCVTCILFEEQRKRERKRKRLIHSSLSLSLCFVLLCFVLCFIVSMRCCLHNPTIQTIMQALQNAGIRVFRRLHSTLS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00442 343 SUPERFAMILY DNA-binding pseudobarrel domain 122 219 IPR015300 -
Phco7g00442 343 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 52 219 IPR044837 -
Phco7g00442 343 Pfam B3 DNA binding domain 128 218 IPR003340 GO:0003677
Phco7g00442 343 SMART B3_2 128 219 IPR003340 GO:0003677
Phco7g00442 343 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Phco7g00442 343 Gene3D - 102 221 IPR015300 -
Phco7g00442 343 CDD B3_DNA 126 217 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00442 Phco-Chr7 3172737 3178610 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phco7g00442 B3 2.4e-14 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00442 7 3172737 3178610 Phco7g00442 7 3172737 3178610 ECH