Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00424 ATGAGCACCGCTAACTCTAACAACCCTTCTTCTCCTCCACCTACCATCAAACAACGTAGGCTCACTCGACAGGGTAGACTCCGATACCTCACTGACAAAGACGCTGGTCTGCATTCCACCACTTCTCTACCCTCTTCTCCTCTTCCCTCCTTCAAGTCCGCTTCCGATCATTGGTCTTCCTCTGCGGTTCCACAACCGCTTCCGCGTCCCGACTCCCCGTTGACCCGCCGATACGACCATCATCACCTCGGATCTCCCCCTTTCGAACATCCTGGCTTCGCTTTTCCCAGAAGGTCGGTGGATCATGAAGCGGTGAGAAGTATAAGGTGTGCCAGTAATTTGGGTAGACCTTTTTTTGATCCGGGGCCTTCTAATGCCAAACACGATTTAAGAGTGAACATTCCACCTGCAAGAGTGTTGGCAGGCAATACTAGTTCATGTAAAGATCACACAGAACACTCTCAAGATAATGACTCCGAAAATGTTTCCAACTTGATATTGCATTTTTCGGCCAAGAGTGCCCCCAATAGCATATTCTCCAGCCCTGTCACTAGTCCACGTAGATCCAGCAATGTAGATTTCTGTGATCCTTCCATCATTTTTCCTCAAGATTTTAATGACATTTTGAGAGTGTCACCGGCTAAAACTGCACAGAGTCCAGACCGGACTCCTCTGCGCAGCCCAGGGAGCCTCCTCCATCCAGAGGGATGTCAGAGTCAGCTTCATAGACATAGCTCAAGAGTGTTGCCTGAAAATAATCATGTTGATGCACATCCACTGCCCCTTCCTCCTAGAGCGTCACCATCGCCAGCACAGTCATCTCCCCAGCATCAACCAAGTATCGTGCACCTTACCGTAGAAAATTCACCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGGGGATCATATGGATCTGTTTATCACGCAACCAACTTAGAGACTGGAGCCTCGTGTGCAATGAAAGAGGTGGAAATGTTCCCCGATGATCCTAAATCTGCCGACTGCATAAAGCAACTGGAACAGGAAATTAGAATTCTCCGTCAATTACACCATCCCAACATTGTGCGGTATTATGGAAGTGAATTAGATGGAGATCGACTGTACATATATATGGAGTATGTTCATCCTGGATCACTTGATAAGTTTATGCATGAACATTGTGGAGCTATGACAGAATCTGTCATTCGCAACTTCACAAGACATATTCTCTCTGGATTGGCATATTTGCATAGTACAAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGTTGGTCGATGCATCAGGCATGGTTAAACTTGCGGATTTCGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGTAGTCCCTACTGGATGGCTCCCGAGCTCATGAAGGCTGCCATAAAGAAAGAATCCAGTCCTGACGTTGCATTGGCCATTGATATATGGAGCTTAGGGTGCACAATCATCGAAATGCTGACAGGAAAACCTCCTTGGGGGGAATATGAAGGGCCGCAAGCCATGTTCAAGGTACTGCACAAATCCCCAAAAATACCTGAAAATTTGTCGTCAGAGGGACAGGATTTCCTTCAGCAGTGCTTCAGGAGGAATCCTGCAGATCGACCATCGGCAGCACTGCTTCTTACTCATGCCTTTGTACAAAATTTGCACGATCAAGATGCTCTACTTCATTCACAAGGGCAAAGCTGTCCCAGAGGAGACCCTGGATCTGGAGATGATTCAAGTAGACATAGCCCCGGTCACAGTTCAAGAAACAATAACCGTGGTGTAGTGCCAGCCTCCATTGGCTCAAGGTTTTTGCACAAAATTCATAATTTAATAGGTGACACTTCGAAAAAATATGACAGCGAGGAATCTAATCATGTCACTTCTTCTCGTAAGTCAGCATGCTCGATGACAGAAATAAACAGTCCTCAATCTCCTTTGAAATCTGGTGCCCTCAATTACATGGCCAATTCCAGCAACATACCCCTCACCACCGTTATGAGAATCATCAGGCACATTTGA 2040 0.4613 MSTANSNNPSSPPPTIKQRRLTRQGRLRYLTDKDAGLHSTTSLPSSPLPSFKSASDHWSSSAVPQPLPRPDSPLTRRYDHHHLGSPPFEHPGFAFPRRSVDHEAVRSIRCASNLGRPFFDPGPSNAKHDLRVNIPPARVLAGNTSSCKDHTEHSQDNDSENVSNLILHFSAKSAPNSIFSSPVTSPRRSSNVDFCDPSIIFPQDFNDILRVSPAKTAQSPDRTPLRSPGSLLHPEGCQSQLHRHSSRVLPENNHVDAHPLPLPPRASPSPAQSSPQHQPSIVHLTVENSPSMKGQWQKGKLIGRGSYGSVYHATNLETGASCAMKEVEMFPDDPKSADCIKQLEQEIRILRQLHHPNIVRYYGSELDGDRLYIYMEYVHPGSLDKFMHEHCGAMTESVIRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGMVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKAAIKKESSPDVALAIDIWSLGCTIIEMLTGKPPWGEYEGPQAMFKVLHKSPKIPENLSSEGQDFLQQCFRRNPADRPSAALLLTHAFVQNLHDQDALLHSQGQSCPRGDPGSGDDSSRHSPGHSSRNNNRGVVPASIGSRFLHKIHNLIGDTSKKYDSEESNHVTSSRKSACSMTEINSPQSPLKSGALNYMANSSNIPLTTVMRIIRHI 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00424 679 MobiDBLite consensus disorder prediction 634 649 - -
Phco7g00424 679 MobiDBLite consensus disorder prediction 212 279 - -
Phco7g00424 679 FunFam Mitogen-activated protein kinase kinase kinase 5 293 595 - -
Phco7g00424 679 MobiDBLite consensus disorder prediction 569 602 - -
Phco7g00424 679 MobiDBLite consensus disorder prediction 1 18 - -
Phco7g00424 679 Pfam Protein kinase domain 297 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00424 679 MobiDBLite consensus disorder prediction 622 649 - -
Phco7g00424 679 SMART serkin_6 296 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00424 679 SUPERFAMILY Protein kinase-like (PK-like) 271 565 IPR011009 -
Phco7g00424 679 ProSiteProfiles Protein kinase domain profile. 296 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00424 679 MobiDBLite consensus disorder prediction 35 62 - -
Phco7g00424 679 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 77 583 - -
Phco7g00424 679 MobiDBLite consensus disorder prediction 1 95 - -
Phco7g00424 679 ProSitePatterns Protein kinases ATP-binding region signature. 302 325 IPR017441 GO:0005524
Phco7g00424 679 Gene3D Transferase(Phosphotransferase) domain 1 293 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00424 Phco-Chr7 2988317 2993908 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco7g00424 Pkinase 2.9e-67 CL0016