Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00408 ATGATCACTAAGCAAAAACTCACGCTTTTCTTCTTCACCTTAGTAGTGGCTGAATTAATACTTTTCATTCCATTAACCACTGCCCAAGTCCAGAACCGCCAGTGCCGCCAAACATGCGGTTCCTCCGATCCCTTCCCTTACCCTTTCGGATTCTCCTCCGGATGCAGAATCCGTTTGAACTGCAGCGGCGGCAGAGCCTCCGTCGGAGAATTCCCCATCCAAAAAGTGAGCATATACAACATAATCGTCACCATCGAAGCTCGGTGCAGTCGTCCAATCGATAGTTTTGGCCAACTCTTCAGCCACAAATACGCGCCCACTTGGCGAAACGTGATTCTGTTAGATAACTGTACCGGAACGCCCTTGCCCTGCTCCATACCCAGGAATCTGGTTCAGACGCACTTCGAATCCGTAGGGTGCAGCAGCACAGGAACGGACAATTTGACTTGCTACTTCGAGAACCAAACGAGGGGTTTCGTGGATCGCCGAAAATTGGATCCTATCGGGTGCAAGTACTTTATGTCGTCTCTTTCATCACCAGATGTTAAAAACCTCTCGGGTGAGCCTCAGTCTTTGGACGTAAATACAATCGAACTCGGATGGTGGGTCCAGGGAGATCGATGTCTGTGTTCTGATGATGCCAATTGTACCACGCTTCATTCCCCGGTTGACGGAAAGCCCGGTTTCCGATGTTACTGTCGTGAAGGCTTTGTCGGCGACGGGTTTTTGGCCGGAGCAGGTTGCCGGAAAGCCTCGTCATGCAACCCAACCAAGTACTTATCTGGCCGATGTGGAGGAACAACAAGATTCATTGTCTTAATCGGAGGGTTTGTTATGGGCGTTTTACTGATTGTTACTGCGGGTTCACTATTTTGTTTCTGCCGCCGTCGTTCCAAACTGAGAGTCACAAAGAGCACGAAAAGACGATTAACCGAAGCCACCGGCAACAACGGTGTTCCTATCTATCCCTACAAAGACATTGAGAGAGCCACGAATAGTTTCTCAGAGAAGCAACGGTTGGGAACTGGGGCGTACGGCACGGTCTATGCTGGGAAACTGTACACCGATGAATGGGTTGCCATCAAAAGACTAAAACACAGGGACACTGACAGTATTGAGCAGGTAATGAACGAGATCAAGCTCCTTTCCTCTGTGAGCCACACCAACTTAGTTCGTTTGTTGGGTTGCTCCATTGAATACGGAGAACAAATCCTAGTGTATGAGTTCATGCCCAATGGAACACTGAGTCAACATTTGCAAAAGGAGAGAGGGCAAGGTCTTCCTTGGTCAGTTCGACTCACGATTGCCACTGAAACAGCACAAGCCATTGCGCATCTTCATTCAGCCATTAGTCCCCCCATTTACCACAGAGACATCAAATCCAGCAACATACTTTTGGACTACAATTTCAGGTCAAAAGTGGCAGACTTTGGTCTTTCTAGACTTGCAATGACCGAAATATCGCACATTTCAACTGCCCCACAGGGAACTCCTGGCTACGTGGATCCACAATACCATCAAGATTTTCACCTCTCTGACAAGAGCGATGTTTATAGTTTTGGTGTTGTTCTTGTTGAGATCATAACGGGGTTAAAAGTGGTAGACTTTTCACGTCCGCATAATGAAGTGAACTTGGCTTCTCTTGCCGCAGATAGGATTGGAAAAGGGCTTTTGAATGAGATTATAGATCCATTCCTTGAACCCGAAGCAAGAAGTGACGCTTGGACCCTTTCCTCCATACACAAGGTGGCTGAGTTGGCATTTAGATGTCTGGCATTCCATAGGGACATGAGGCCTTCGATGACGGAAGTGGCTTGTGAGTTGGAGCAACTTAGGTTGAGTAAATGGACAACATTGGGAGACAACACTTGTGCAACCTCAACTGAGTTGTCCTCTTGCTCTTCCTCCTCCAATGAAAGTGAGAAGAAACCACTAAGTACCACAAAAGAGAACGATGGAGAAAGGGGAAAAGGGTACCCTAACTTCCAAACCAGACCTATAAAATCATTACAAAGGCCTAATAGTAATTCACCAGTCTCGGTTCAAGACCAAGAGTTATGGTTGAGTGAACAGAGTTCTCCTTCATCAAATAGTTTTCCAAGCAAGTCATTTGATATATAG 2121 0.4696 MITKQKLTLFFFTLVVAELILFIPLTTAQVQNRQCRQTCGSSDPFPYPFGFSSGCRIRLNCSGGRASVGEFPIQKVSIYNIIVTIEARCSRPIDSFGQLFSHKYAPTWRNVILLDNCTGTPLPCSIPRNLVQTHFESVGCSSTGTDNLTCYFENQTRGFVDRRKLDPIGCKYFMSSLSSPDVKNLSGEPQSLDVNTIELGWWVQGDRCLCSDDANCTTLHSPVDGKPGFRCYCREGFVGDGFLAGAGCRKASSCNPTKYLSGRCGGTTRFIVLIGGFVMGVLLIVTAGSLFCFCRRRSKLRVTKSTKRRLTEATGNNGVPIYPYKDIERATNSFSEKQRLGTGAYGTVYAGKLYTDEWVAIKRLKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQKERGQGLPWSVRLTIATETAQAIAHLHSAISPPIYHRDIKSSNILLDYNFRSKVADFGLSRLAMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFSRPHNEVNLASLAADRIGKGLLNEIIDPFLEPEARSDAWTLSSIHKVAELAFRCLAFHRDMRPSMTEVACELEQLRLSKWTTLGDNTCATSTELSSCSSSSNESEKKPLSTTKENDGERGKGYPNFQTRPIKSLQRPNSNSPVSVQDQELWLSEQSSPSSNSFPSKSFDI 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00408 706 MobiDBLite consensus disorder prediction 664 706 - -
Phco7g00408 706 Pfam Protein kinase domain 334 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00408 706 Gene3D Transferase(Phosphotransferase) domain 1 410 627 - -
Phco7g00408 706 SMART serkin_6 334 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00408 706 MobiDBLite consensus disorder prediction 627 642 - -
Phco7g00408 706 SUPERFAMILY Protein kinase-like (PK-like) 313 608 IPR011009 -
Phco7g00408 706 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Phco7g00408 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Phco7g00408 706 FunFam Wall-associated receptor kinase-like 14 isoform A 208 243 - -
Phco7g00408 706 MobiDBLite consensus disorder prediction 627 706 - -
Phco7g00408 706 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Phco7g00408 706 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 650 IPR044652 GO:0004672
Phco7g00408 706 ProSiteProfiles Protein kinase domain profile. 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00408 706 FunFam Wall-associated receptor kinase-like 14 301 409 - -
Phco7g00408 706 FunFam Wall-associated receptor kinase-like 20 410 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00408 Phco-Chr7 2899360 2904739 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco7g00408 Pkinase 2.1e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00408 7 2899360 2904739 Phco7g00408 7 2899360 2904739 ECH