Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00368 ATGGGTTGGACACGAGAAGAGAATAGACGTTTTGAAGATGCTCTCGCTGTTCATGGTCCTGATGACCCAAATCGGTGGCAACATGTAGCTGACGCCGTGGGTGGAAAATCCGTAGAAGAGGTGAAAATGCACTATGAGATCCTCAAGGAAGACGTCATTCGAATTGAGCGAGATCAAATCCCACTACCCAGGTACAGAGGTGCCAGCATCAATGGAAGACAAATTGACAATGAGCAAAGGAGAATGAGGAATCTGACTCTCCGATGA 267 0.4719 MGWTREENRRFEDALAVHGPDDPNRWQHVADAVGGKSVEEVKMHYEILKEDVIRIERDQIPLPRYRGASINGRQIDNEQRRMRNLTLR 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00368 88 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Phco7g00368 88 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Phco7g00368 88 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Phco7g00368 88 SMART sant 3 51 IPR001005 -
Phco7g00368 88 Gene3D - 2 51 - -
Phco7g00368 88 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 75 IPR044636 GO:0003700
Phco7g00368 88 CDD SANT 3 49 IPR001005 -
Phco7g00368 88 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Phco7g00368 88 FunFam Transcription factor SRM1 1 62 - -
Phco7g00368 88 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00368 Phco-Chr7 2585738 2586682 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco7g00368 Myb_DNA-binding 9.2e-08 CL0123